Protein–RNA interactions for Protein: O14917

PCDH17, Protocadherin-17, humanhuman

Predictions only

Length 1,159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH17O14917 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC14.58□□□□□ -0.07
PCDH17O14917 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.07
PCDH17O14917 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
PCDH17O14917 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC14.58□□□□□ -0.07
PCDH17O14917 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
PCDH17O14917 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
PCDH17O14917 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
PCDH17O14917 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
PCDH17O14917 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
PCDH17O14917 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.08
PCDH17O14917 LINC00552-201ENST00000625151 2579 ntBASIC14.58□□□□□ -0.08
PCDH17O14917 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
PCDH17O14917 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC14.58□□□□□ -0.08
PCDH17O14917 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
PCDH17O14917 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
PCDH17O14917 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
PCDH17O14917 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC14.58□□□□□ -0.08
PCDH17O14917 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
PCDH17O14917 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
PCDH17O14917 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
PCDH17O14917 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
PCDH17O14917 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC14.58□□□□□ -0.08
PCDH17O14917 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
PCDH17O14917 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
PCDH17O14917 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC14.58□□□□□ -0.08
PCDH17O14917 MIR1909-201ENST00000411312 80 ntBASIC14.58□□□□□ -0.08
PCDH17O14917 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC14.58□□□□□ -0.08
PCDH17O14917 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC14.58□□□□□ -0.08
PCDH17O14917 AC112492.5-201ENST00000421897 457 ntBASIC14.58□□□□□ -0.08
PCDH17O14917 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC14.58□□□□□ -0.08
PCDH17O14917 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC14.58□□□□□ -0.08
PCDH17O14917 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC14.58□□□□□ -0.08
PCDH17O14917 HNRNPA1P13-201ENST00000510646 963 ntBASIC14.58□□□□□ -0.08
PCDH17O14917 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
PCDH17O14917 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC14.58□□□□□ -0.08
PCDH17O14917 PTP4A1P2-201ENST00000546033 454 ntBASIC14.58□□□□□ -0.08
PCDH17O14917 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
PCDH17O14917 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC14.58□□□□□ -0.08
PCDH17O14917 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC14.58□□□□□ -0.08
PCDH17O14917 AP001063.1-201ENST00000568332 529 ntBASIC14.58□□□□□ -0.08
PCDH17O14917 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC14.58□□□□□ -0.08
PCDH17O14917 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC14.58□□□□□ -0.08
PCDH17O14917 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC14.58□□□□□ -0.08
PCDH17O14917 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
PCDH17O14917 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC14.58□□□□□ -0.08
PCDH17O14917 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
PCDH17O14917 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.08
PCDH17O14917 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC14.58□□□□□ -0.08
PCDH17O14917 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
PCDH17O14917 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
PCDH17O14917 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.08
PCDH17O14917 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
PCDH17O14917 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
PCDH17O14917 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC14.58□□□□□ -0.08
PCDH17O14917 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC14.58□□□□□ -0.08
PCDH17O14917 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
PCDH17O14917 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
PCDH17O14917 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
PCDH17O14917 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
PCDH17O14917 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
PCDH17O14917 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC14.58□□□□□ -0.08
PCDH17O14917 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
PCDH17O14917 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC14.57□□□□□ -0.08
PCDH17O14917 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC14.57□□□□□ -0.08
PCDH17O14917 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
PCDH17O14917 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
PCDH17O14917 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC14.57□□□□□ -0.08
PCDH17O14917 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC14.57□□□□□ -0.08
PCDH17O14917 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
PCDH17O14917 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC14.57□□□□□ -0.08
PCDH17O14917 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
PCDH17O14917 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
PCDH17O14917 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC14.57□□□□□ -0.08
PCDH17O14917 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
PCDH17O14917 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
PCDH17O14917 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC14.57□□□□□ -0.08
PCDH17O14917 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC14.57□□□□□ -0.08
PCDH17O14917 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
PCDH17O14917 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC14.57□□□□□ -0.08
PCDH17O14917 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
PCDH17O14917 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
PCDH17O14917 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
PCDH17O14917 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
PCDH17O14917 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
PCDH17O14917 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC14.57□□□□□ -0.08
PCDH17O14917 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
PCDH17O14917 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
PCDH17O14917 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC14.57□□□□□ -0.08
PCDH17O14917 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC14.57□□□□□ -0.08
PCDH17O14917 RPS2P32-201ENST00000439199 892 ntBASIC14.57□□□□□ -0.08
PCDH17O14917 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC14.57□□□□□ -0.08
PCDH17O14917 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC14.57□□□□□ -0.08
PCDH17O14917 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
PCDH17O14917 AL359711.2-201ENST00000563105 872 ntBASIC14.57□□□□□ -0.08
PCDH17O14917 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC14.57□□□□□ -0.08
PCDH17O14917 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC14.57□□□□□ -0.08
PCDH17O14917 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC14.57□□□□□ -0.08
PCDH17O14917 AC233724.13-201ENST00000598383 410 ntBASIC14.57□□□□□ -0.08
PCDH17O14917 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
PCDH17O14917 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC14.57□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 67.1 ms