Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 SLC26A6-205ENST00000395550 2589 ntAPPRIS P3 TSL 1 (best) BASIC8.39□□□□□ -1.07
CHKB-CPT1BH3BT56 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
CHKB-CPT1BH3BT56 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC8.39□□□□□ -1.07
CHKB-CPT1BH3BT56 RAB42-201ENST00000373826 1950 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
CHKB-CPT1BH3BT56 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
CHKB-CPT1BH3BT56 LGALS9-201ENST00000302228 3018 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
CHKB-CPT1BH3BT56 SEPT6-205ENST00000394610 4694 ntAPPRIS ALT1 TSL 1 (best) BASIC8.39□□□□□ -1.07
CHKB-CPT1BH3BT56 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC8.39□□□□□ -1.07
CHKB-CPT1BH3BT56 AC090616.6-203ENST00000579186 1945 ntBASIC8.39□□□□□ -1.07
CHKB-CPT1BH3BT56 AC096733.2-201ENST00000609937 1394 ntBASIC8.39□□□□□ -1.07
CHKB-CPT1BH3BT56 FARP2-201ENST00000264042 4051 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
CHKB-CPT1BH3BT56 FOXP3-204ENST00000455775 2448 ntTSL 5 BASIC8.39□□□□□ -1.07
CHKB-CPT1BH3BT56 AC026992.2-203ENST00000563004 2419 ntBASIC8.39□□□□□ -1.07
CHKB-CPT1BH3BT56 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC8.39□□□□□ -1.07
CHKB-CPT1BH3BT56 AC004997.1-205ENST00000447976 1851 ntTSL 2 BASIC8.39□□□□□ -1.07
CHKB-CPT1BH3BT56 VENTX-201ENST00000325980 2911 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
CHKB-CPT1BH3BT56 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
CHKB-CPT1BH3BT56 CSF3R-201ENST00000331941 2375 ntTSL 5 BASIC8.39□□□□□ -1.07
CHKB-CPT1BH3BT56 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC8.39□□□□□ -1.07
CHKB-CPT1BH3BT56 ARNT2-201ENST00000303329 6558 ntAPPRIS P2 TSL 1 (best) BASIC8.39□□□□□ -1.07
CHKB-CPT1BH3BT56 KIF1B-212ENST00000622724 8588 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
CHKB-CPT1BH3BT56 AC011298.1-201ENST00000407635 3398 ntTSL 2 BASIC8.39□□□□□ -1.07
CHKB-CPT1BH3BT56 MYH13-203ENST00000621918 5916 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
CHKB-CPT1BH3BT56 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
CHKB-CPT1BH3BT56 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
CHKB-CPT1BH3BT56 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
CHKB-CPT1BH3BT56 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
CHKB-CPT1BH3BT56 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
CHKB-CPT1BH3BT56 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
CHKB-CPT1BH3BT56 LRRCC1-201ENST00000360375 3813 ntAPPRIS P2 TSL 1 (best) BASIC8.39□□□□□ -1.07
CHKB-CPT1BH3BT56 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC8.39□□□□□ -1.07
CHKB-CPT1BH3BT56 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
CHKB-CPT1BH3BT56 DDT-203ENST00000403754 569 ntTSL 3 BASIC8.39□□□□□ -1.07
CHKB-CPT1BH3BT56 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
CHKB-CPT1BH3BT56 DDT-206ENST00000430101 573 ntTSL 2 BASIC8.39□□□□□ -1.07
CHKB-CPT1BH3BT56 PVRIG2P-201ENST00000435460 978 ntBASIC8.39□□□□□ -1.07
CHKB-CPT1BH3BT56 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC8.39□□□□□ -1.07
CHKB-CPT1BH3BT56 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC8.39□□□□□ -1.07
CHKB-CPT1BH3BT56 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC8.39□□□□□ -1.07
CHKB-CPT1BH3BT56 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC8.39□□□□□ -1.07
CHKB-CPT1BH3BT56 AC024563.2-201ENST00000603282 481 ntBASIC8.39□□□□□ -1.07
CHKB-CPT1BH3BT56 AL353708.3-201ENST00000610272 989 ntBASIC8.39□□□□□ -1.07
CHKB-CPT1BH3BT56 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC8.39□□□□□ -1.07
CHKB-CPT1BH3BT56 ABBA01031661.1-201ENST00000634362 1253 ntBASIC8.39□□□□□ -1.07
CHKB-CPT1BH3BT56 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
CHKB-CPT1BH3BT56 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC8.39□□□□□ -1.07
CHKB-CPT1BH3BT56 DGKH-203ENST00000379274 4202 ntTSL 2 BASIC8.39□□□□□ -1.07
CHKB-CPT1BH3BT56 ATRIP-204ENST00000412052 2721 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
CHKB-CPT1BH3BT56 DGKZ-216ENST00000528615 2692 ntTSL 5 BASIC8.39□□□□□ -1.07
CHKB-CPT1BH3BT56 AC015819.3-201ENST00000624305 2674 ntBASIC8.39□□□□□ -1.07
CHKB-CPT1BH3BT56 STK11IP-204ENST00000456909 3615 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
CHKB-CPT1BH3BT56 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC8.39□□□□□ -1.07
CHKB-CPT1BH3BT56 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC8.39□□□□□ -1.07
CHKB-CPT1BH3BT56 CUL4A-203ENST00000375441 4037 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
CHKB-CPT1BH3BT56 NLRP2-201ENST00000263437 3496 ntAPPRIS ALT2 TSL 2 BASIC8.39□□□□□ -1.07
CHKB-CPT1BH3BT56 PHC2-201ENST00000257118 3870 ntAPPRIS P4 TSL 1 (best) BASIC8.39□□□□□ -1.07
CHKB-CPT1BH3BT56 ADGRG6-203ENST00000367608 6879 ntAPPRIS ALT1 TSL 1 (best) BASIC8.39□□□□□ -1.07
CHKB-CPT1BH3BT56 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
CHKB-CPT1BH3BT56 IKBKB-218ENST00000520835 2403 ntTSL 2 BASIC8.39□□□□□ -1.07
CHKB-CPT1BH3BT56 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC8.39□□□□□ -1.07
CHKB-CPT1BH3BT56 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
CHKB-CPT1BH3BT56 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
CHKB-CPT1BH3BT56 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC8.39□□□□□ -1.07
CHKB-CPT1BH3BT56 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
CHKB-CPT1BH3BT56 GOLGA2P5-201ENST00000266746 2395 ntBASIC8.39□□□□□ -1.07
CHKB-CPT1BH3BT56 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC8.39□□□□□ -1.07
CHKB-CPT1BH3BT56 RYR2-202ENST00000366574 16562 ntAPPRIS P2 TSL 1 (best) BASIC8.38□□□□□ -1.07
CHKB-CPT1BH3BT56 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC8.38□□□□□ -1.07
CHKB-CPT1BH3BT56 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC8.38□□□□□ -1.07
CHKB-CPT1BH3BT56 AL135905.2-201ENST00000584934 1404 ntBASIC8.38□□□□□ -1.07
CHKB-CPT1BH3BT56 PPP6R3-204ENST00000393801 5069 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
CHKB-CPT1BH3BT56 EP400NL-208ENST00000475841 7090 ntTSL 2 BASIC8.38□□□□□ -1.07
CHKB-CPT1BH3BT56 FBF1-210ENST00000592193 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC8.38□□□□□ -1.07
CHKB-CPT1BH3BT56 ZNF641-203ENST00000544117 7819 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
CHKB-CPT1BH3BT56 NPNT-211ENST00000506666 2187 ntTSL 2 BASIC8.38□□□□□ -1.07
CHKB-CPT1BH3BT56 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
CHKB-CPT1BH3BT56 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
CHKB-CPT1BH3BT56 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC8.38□□□□□ -1.07
CHKB-CPT1BH3BT56 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
CHKB-CPT1BH3BT56 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
CHKB-CPT1BH3BT56 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC8.38□□□□□ -1.07
CHKB-CPT1BH3BT56 EPS15L1-202ENST00000455140 3266 ntAPPRIS P1 TSL 2 BASIC8.38□□□□□ -1.07
CHKB-CPT1BH3BT56 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
CHKB-CPT1BH3BT56 NGLY1-205ENST00000417874 2062 ntTSL 2 BASIC8.38□□□□□ -1.07
CHKB-CPT1BH3BT56 GRM2-202ENST00000395052 3151 ntAPPRIS P1 TSL 2 BASIC8.38□□□□□ -1.07
CHKB-CPT1BH3BT56 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC8.38□□□□□ -1.07
CHKB-CPT1BH3BT56 CDC42BPA-202ENST00000366764 10445 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
CHKB-CPT1BH3BT56 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
CHKB-CPT1BH3BT56 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
CHKB-CPT1BH3BT56 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC8.38□□□□□ -1.07
CHKB-CPT1BH3BT56 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC8.38□□□□□ -1.07
CHKB-CPT1BH3BT56 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
CHKB-CPT1BH3BT56 AC004945.1-201ENST00000416738 983 ntBASIC8.38□□□□□ -1.07
CHKB-CPT1BH3BT56 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
CHKB-CPT1BH3BT56 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC8.38□□□□□ -1.07
CHKB-CPT1BH3BT56 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC8.38□□□□□ -1.07
CHKB-CPT1BH3BT56 AC011506.1-201ENST00000474329 610 ntBASIC8.38□□□□□ -1.07
CHKB-CPT1BH3BT56 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC8.38□□□□□ -1.07
CHKB-CPT1BH3BT56 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC8.38□□□□□ -1.07
CHKB-CPT1BH3BT56 TK2-208ENST00000545043 1120 ntTSL 2 BASIC8.38□□□□□ -1.07
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms