Protein–RNA interactions for Protein: Q9P2N7

KLHL13, Kelch-like protein 13, humanhuman

Predictions only

Length 655 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL13Q9P2N7 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
KLHL13Q9P2N7 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
KLHL13Q9P2N7 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
KLHL13Q9P2N7 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
KLHL13Q9P2N7 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC13.79□□□□□ -0.2
KLHL13Q9P2N7 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
KLHL13Q9P2N7 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
KLHL13Q9P2N7 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
KLHL13Q9P2N7 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC13.79□□□□□ -0.2
KLHL13Q9P2N7 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC13.79□□□□□ -0.2
KLHL13Q9P2N7 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC13.79□□□□□ -0.2
KLHL13Q9P2N7 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC13.79□□□□□ -0.2
KLHL13Q9P2N7 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
KLHL13Q9P2N7 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC13.78□□□□□ -0.2
KLHL13Q9P2N7 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
KLHL13Q9P2N7 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC13.78□□□□□ -0.2
KLHL13Q9P2N7 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
KLHL13Q9P2N7 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC13.78□□□□□ -0.2
KLHL13Q9P2N7 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
KLHL13Q9P2N7 ZBED1P1-201ENST00000502364 1930 ntBASIC13.78□□□□□ -0.2
KLHL13Q9P2N7 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
KLHL13Q9P2N7 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
KLHL13Q9P2N7 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
KLHL13Q9P2N7 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
KLHL13Q9P2N7 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
KLHL13Q9P2N7 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
KLHL13Q9P2N7 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
KLHL13Q9P2N7 OR2I1P-210ENST00000642037 4691 ntBASIC13.78□□□□□ -0.2
KLHL13Q9P2N7 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC13.78□□□□□ -0.2
KLHL13Q9P2N7 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC13.78□□□□□ -0.2
KLHL13Q9P2N7 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
KLHL13Q9P2N7 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
KLHL13Q9P2N7 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC13.78□□□□□ -0.2
KLHL13Q9P2N7 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
KLHL13Q9P2N7 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC13.78□□□□□ -0.2
KLHL13Q9P2N7 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
KLHL13Q9P2N7 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
KLHL13Q9P2N7 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
KLHL13Q9P2N7 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC13.78□□□□□ -0.2
KLHL13Q9P2N7 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC13.78□□□□□ -0.2
KLHL13Q9P2N7 GIMAP3P-201ENST00000495150 836 ntBASIC13.78□□□□□ -0.2
KLHL13Q9P2N7 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
KLHL13Q9P2N7 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
KLHL13Q9P2N7 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC13.78□□□□□ -0.2
KLHL13Q9P2N7 PIGL-212ENST00000581006 554 ntTSL 4 BASIC13.78□□□□□ -0.2
KLHL13Q9P2N7 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC13.78□□□□□ -0.2
KLHL13Q9P2N7 IGHV3-72-202ENST00000621503 303 ntBASIC13.78□□□□□ -0.2
KLHL13Q9P2N7 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC13.78□□□□□ -0.2
KLHL13Q9P2N7 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
KLHL13Q9P2N7 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
KLHL13Q9P2N7 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC13.78□□□□□ -0.2
KLHL13Q9P2N7 WASH3P-207ENST00000560956 1394 ntBASIC13.78□□□□□ -0.2
KLHL13Q9P2N7 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
KLHL13Q9P2N7 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC13.78□□□□□ -0.2
KLHL13Q9P2N7 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
KLHL13Q9P2N7 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
KLHL13Q9P2N7 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
KLHL13Q9P2N7 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
KLHL13Q9P2N7 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
KLHL13Q9P2N7 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
KLHL13Q9P2N7 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
KLHL13Q9P2N7 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
KLHL13Q9P2N7 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC13.78□□□□□ -0.2
KLHL13Q9P2N7 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
KLHL13Q9P2N7 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
KLHL13Q9P2N7 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
KLHL13Q9P2N7 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
KLHL13Q9P2N7 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
KLHL13Q9P2N7 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC13.78□□□□□ -0.2
KLHL13Q9P2N7 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
KLHL13Q9P2N7 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
KLHL13Q9P2N7 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
KLHL13Q9P2N7 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
KLHL13Q9P2N7 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC13.77□□□□□ -0.2
KLHL13Q9P2N7 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
KLHL13Q9P2N7 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
KLHL13Q9P2N7 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC13.77□□□□□ -0.2
KLHL13Q9P2N7 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
KLHL13Q9P2N7 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
KLHL13Q9P2N7 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
KLHL13Q9P2N7 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC13.77□□□□□ -0.21
KLHL13Q9P2N7 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
KLHL13Q9P2N7 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
KLHL13Q9P2N7 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
KLHL13Q9P2N7 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
KLHL13Q9P2N7 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
KLHL13Q9P2N7 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
KLHL13Q9P2N7 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
KLHL13Q9P2N7 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC13.77□□□□□ -0.21
KLHL13Q9P2N7 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
KLHL13Q9P2N7 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC13.77□□□□□ -0.21
KLHL13Q9P2N7 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC13.77□□□□□ -0.21
KLHL13Q9P2N7 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC13.77□□□□□ -0.21
KLHL13Q9P2N7 TTTY23B-201ENST00000442790 549 ntBASIC13.77□□□□□ -0.21
KLHL13Q9P2N7 AC007389.4-201ENST00000454674 793 ntBASIC13.77□□□□□ -0.21
KLHL13Q9P2N7 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC13.77□□□□□ -0.21
KLHL13Q9P2N7 GAPDHP40-201ENST00000505218 1006 ntBASIC13.77□□□□□ -0.21
KLHL13Q9P2N7 GLI4-203ENST00000517468 963 ntTSL 5 BASIC13.77□□□□□ -0.21
KLHL13Q9P2N7 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.21
KLHL13Q9P2N7 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 65.3 ms