Protein–RNA interactions for Protein: Q9NP62

GCM1, Chorion-specific transcription factor GCMa, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GCM1Q9NP62 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
GCM1Q9NP62 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
GCM1Q9NP62 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
GCM1Q9NP62 RIC1-204ENST00000418622 6658 ntTSL 5 BASIC13.07□□□□□ -0.32
GCM1Q9NP62 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
GCM1Q9NP62 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
GCM1Q9NP62 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
GCM1Q9NP62 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC13.07□□□□□ -0.32
GCM1Q9NP62 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC13.06□□□□□ -0.32
GCM1Q9NP62 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
GCM1Q9NP62 PPFIA4-202ENST00000295706 6395 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
GCM1Q9NP62 CMTR2-201ENST00000338099 4869 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
GCM1Q9NP62 VAPA-202ENST00000400000 6815 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
GCM1Q9NP62 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC13.06□□□□□ -0.32
GCM1Q9NP62 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC13.06□□□□□ -0.32
GCM1Q9NP62 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
GCM1Q9NP62 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC13.06□□□□□ -0.32
GCM1Q9NP62 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
GCM1Q9NP62 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
GCM1Q9NP62 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC13.06□□□□□ -0.32
GCM1Q9NP62 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC13.06□□□□□ -0.32
GCM1Q9NP62 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
GCM1Q9NP62 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC13.06□□□□□ -0.32
GCM1Q9NP62 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
GCM1Q9NP62 CTBP1-AS2-206ENST00000581398 5652 ntBASIC13.06□□□□□ -0.32
GCM1Q9NP62 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC13.06□□□□□ -0.32
GCM1Q9NP62 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC13.06□□□□□ -0.32
GCM1Q9NP62 SAMD4A-202ENST00000392067 6833 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
GCM1Q9NP62 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
GCM1Q9NP62 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
GCM1Q9NP62 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
GCM1Q9NP62 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC13.06□□□□□ -0.32
GCM1Q9NP62 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC13.06□□□□□ -0.32
GCM1Q9NP62 COL20A1-203ENST00000422202 8097 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
GCM1Q9NP62 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC13.06□□□□□ -0.32
GCM1Q9NP62 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
GCM1Q9NP62 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
GCM1Q9NP62 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
GCM1Q9NP62 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
GCM1Q9NP62 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
GCM1Q9NP62 COX5BP8-201ENST00000416911 349 ntBASIC13.06□□□□□ -0.32
GCM1Q9NP62 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
GCM1Q9NP62 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC13.06□□□□□ -0.32
GCM1Q9NP62 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC13.06□□□□□ -0.32
GCM1Q9NP62 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC13.06□□□□□ -0.32
GCM1Q9NP62 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC13.06□□□□□ -0.32
GCM1Q9NP62 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC13.06□□□□□ -0.32
GCM1Q9NP62 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC13.06□□□□□ -0.32
GCM1Q9NP62 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC13.06□□□□□ -0.32
GCM1Q9NP62 NEU3-203ENST00000529024 581 ntTSL 3 BASIC13.06□□□□□ -0.32
GCM1Q9NP62 ENPP7P5-201ENST00000541031 1031 ntBASIC13.06□□□□□ -0.32
GCM1Q9NP62 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC13.06□□□□□ -0.32
GCM1Q9NP62 POLE2-203ENST00000553805 496 ntTSL 2 BASIC13.06□□□□□ -0.32
GCM1Q9NP62 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
GCM1Q9NP62 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC13.06□□□□□ -0.32
GCM1Q9NP62 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC13.06□□□□□ -0.32
GCM1Q9NP62 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC13.06□□□□□ -0.32
GCM1Q9NP62 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC13.06□□□□□ -0.32
GCM1Q9NP62 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC13.06□□□□□ -0.32
GCM1Q9NP62 B3GAT1-203ENST00000524765 5737 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
GCM1Q9NP62 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
GCM1Q9NP62 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
GCM1Q9NP62 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
GCM1Q9NP62 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC13.06□□□□□ -0.32
GCM1Q9NP62 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
GCM1Q9NP62 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
GCM1Q9NP62 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC13.06□□□□□ -0.32
GCM1Q9NP62 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
GCM1Q9NP62 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
GCM1Q9NP62 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
GCM1Q9NP62 RAPGEF3-205ENST00000449771 6061 ntAPPRIS ALT2 TSL 2 BASIC13.06□□□□□ -0.32
GCM1Q9NP62 PLXNB2-201ENST00000359337 6335 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
GCM1Q9NP62 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
GCM1Q9NP62 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
GCM1Q9NP62 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC13.05□□□□□ -0.32
GCM1Q9NP62 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
GCM1Q9NP62 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC13.05□□□□□ -0.32
GCM1Q9NP62 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
GCM1Q9NP62 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC13.05□□□□□ -0.32
GCM1Q9NP62 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
GCM1Q9NP62 AC112693.3-201ENST00000624819 1983 ntBASIC13.05□□□□□ -0.32
GCM1Q9NP62 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
GCM1Q9NP62 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
GCM1Q9NP62 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
GCM1Q9NP62 C18orf15-201ENST00000623680 2534 ntBASIC13.05□□□□□ -0.32
GCM1Q9NP62 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
GCM1Q9NP62 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC13.05□□□□□ -0.32
GCM1Q9NP62 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC13.05□□□□□ -0.32
GCM1Q9NP62 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC13.05□□□□□ -0.32
GCM1Q9NP62 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
GCM1Q9NP62 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
GCM1Q9NP62 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
GCM1Q9NP62 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
GCM1Q9NP62 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
GCM1Q9NP62 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
GCM1Q9NP62 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
GCM1Q9NP62 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC13.05□□□□□ -0.32
GCM1Q9NP62 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC13.05□□□□□ -0.32
GCM1Q9NP62 CR383656.12-201ENST00000549567 513 ntBASIC13.05□□□□□ -0.32
GCM1Q9NP62 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC13.05□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms