Protein–RNA interactions for Protein: Q9C040

TRIM2, Tripartite motif-containing protein 2, humanhuman

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM2Q9C040 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRIM2Q9C040 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRIM2Q9C040 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRIM2Q9C040 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRIM2Q9C040 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRIM2Q9C040 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC14.07□□□□□ -0.16
TRIM2Q9C040 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
TRIM2Q9C040 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
TRIM2Q9C040 SUN1-204ENST00000403868 978 ntTSL 2 BASIC14.07□□□□□ -0.16
TRIM2Q9C040 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRIM2Q9C040 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC14.07□□□□□ -0.16
TRIM2Q9C040 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
TRIM2Q9C040 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC14.07□□□□□ -0.16
TRIM2Q9C040 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC14.07□□□□□ -0.16
TRIM2Q9C040 SAMD11P1-201ENST00000571429 661 ntBASIC14.07□□□□□ -0.16
TRIM2Q9C040 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
TRIM2Q9C040 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC14.07□□□□□ -0.16
TRIM2Q9C040 PRR29-204ENST00000577953 565 ntTSL 4 BASIC14.07□□□□□ -0.16
TRIM2Q9C040 INO80C-210ENST00000590757 595 ntTSL 2 BASIC14.07□□□□□ -0.16
TRIM2Q9C040 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC14.07□□□□□ -0.16
TRIM2Q9C040 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC14.07□□□□□ -0.16
TRIM2Q9C040 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC14.07□□□□□ -0.16
TRIM2Q9C040 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRIM2Q9C040 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
TRIM2Q9C040 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC14.07□□□□□ -0.16
TRIM2Q9C040 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRIM2Q9C040 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
TRIM2Q9C040 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC14.07□□□□□ -0.16
TRIM2Q9C040 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRIM2Q9C040 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRIM2Q9C040 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
TRIM2Q9C040 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRIM2Q9C040 ELK4-202ENST00000357992 10239 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRIM2Q9C040 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRIM2Q9C040 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRIM2Q9C040 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
TRIM2Q9C040 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC14.06□□□□□ -0.16
TRIM2Q9C040 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRIM2Q9C040 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC14.06□□□□□ -0.16
TRIM2Q9C040 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
TRIM2Q9C040 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC14.06□□□□□ -0.16
TRIM2Q9C040 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRIM2Q9C040 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC14.06□□□□□ -0.16
TRIM2Q9C040 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
TRIM2Q9C040 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
TRIM2Q9C040 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC14.06□□□□□ -0.16
TRIM2Q9C040 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC14.06□□□□□ -0.16
TRIM2Q9C040 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRIM2Q9C040 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC14.06□□□□□ -0.16
TRIM2Q9C040 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRIM2Q9C040 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC14.06□□□□□ -0.16
TRIM2Q9C040 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRIM2Q9C040 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRIM2Q9C040 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
TRIM2Q9C040 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC14.06□□□□□ -0.16
TRIM2Q9C040 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC14.06□□□□□ -0.16
TRIM2Q9C040 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRIM2Q9C040 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRIM2Q9C040 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRIM2Q9C040 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
TRIM2Q9C040 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
TRIM2Q9C040 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC14.06□□□□□ -0.16
TRIM2Q9C040 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRIM2Q9C040 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
TRIM2Q9C040 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC14.06□□□□□ -0.16
TRIM2Q9C040 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
TRIM2Q9C040 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
TRIM2Q9C040 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC14.06□□□□□ -0.16
TRIM2Q9C040 AC004066.1-201ENST00000502488 802 ntBASIC14.06□□□□□ -0.16
TRIM2Q9C040 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC14.06□□□□□ -0.16
TRIM2Q9C040 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC14.06□□□□□ -0.16
TRIM2Q9C040 AC009407.1-201ENST00000568958 598 ntBASIC14.06□□□□□ -0.16
TRIM2Q9C040 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC14.06□□□□□ -0.16
TRIM2Q9C040 AC009118.2-201ENST00000613275 655 ntBASIC14.06□□□□□ -0.16
TRIM2Q9C040 AL158212.4-201ENST00000624062 1286 ntBASIC14.06□□□□□ -0.16
TRIM2Q9C040 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRIM2Q9C040 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRIM2Q9C040 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
TRIM2Q9C040 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
TRIM2Q9C040 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRIM2Q9C040 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC14.06□□□□□ -0.16
TRIM2Q9C040 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRIM2Q9C040 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC14.06□□□□□ -0.16
TRIM2Q9C040 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRIM2Q9C040 RER1-203ENST00000378513 3000 ntTSL 3 BASIC14.06□□□□□ -0.16
TRIM2Q9C040 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC14.06□□□□□ -0.16
TRIM2Q9C040 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRIM2Q9C040 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC14.06□□□□□ -0.16
TRIM2Q9C040 RP1L1-202ENST00000382483 7973 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRIM2Q9C040 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRIM2Q9C040 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
TRIM2Q9C040 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRIM2Q9C040 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRIM2Q9C040 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
TRIM2Q9C040 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC14.05□□□□□ -0.16
TRIM2Q9C040 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRIM2Q9C040 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRIM2Q9C040 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRIM2Q9C040 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
TRIM2Q9C040 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 60.3 ms