Protein–RNA interactions for Protein: Q9BWG4

SSBP4, Single-stranded DNA-binding protein 4, humanhuman

Predicted RBP Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4Q9BWG4 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
SSBP4Q9BWG4 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC11.63□□□□□ -0.55
SSBP4Q9BWG4 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC11.63□□□□□ -0.55
SSBP4Q9BWG4 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
SSBP4Q9BWG4 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
SSBP4Q9BWG4 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
SSBP4Q9BWG4 HAGLR-202ENST00000416928 4235 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
SSBP4Q9BWG4 PRAME-214ENST00000543184 2758 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
SSBP4Q9BWG4 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
SSBP4Q9BWG4 LINC01837-201ENST00000590021 1320 ntTSL 5 BASIC11.62□□□□□ -0.55
SSBP4Q9BWG4 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC11.62□□□□□ -0.55
SSBP4Q9BWG4 TP53I11-222ENST00000616990 3567 ntAPPRIS P1 TSL 2 BASIC11.62□□□□□ -0.55
SSBP4Q9BWG4 PRKCB-201ENST00000303531 7969 ntAPPRIS P4 TSL 1 (best) BASIC11.62□□□□□ -0.55
SSBP4Q9BWG4 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
SSBP4Q9BWG4 ATG14-201ENST00000247178 4742 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
SSBP4Q9BWG4 EHMT2-204ENST00000395728 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
SSBP4Q9BWG4 ZNF395-201ENST00000344423 4808 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
SSBP4Q9BWG4 VIPR1-202ENST00000433647 3161 ntTSL 2 BASIC11.62□□□□□ -0.55
SSBP4Q9BWG4 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
SSBP4Q9BWG4 MPI-203ENST00000535694 1523 ntTSL 2 BASIC11.62□□□□□ -0.55
SSBP4Q9BWG4 TCAF1P1-201ENST00000414990 2232 ntBASIC11.62□□□□□ -0.55
SSBP4Q9BWG4 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC11.62□□□□□ -0.55
SSBP4Q9BWG4 WIZ-202ENST00000389282 4067 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
SSBP4Q9BWG4 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
SSBP4Q9BWG4 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC11.62□□□□□ -0.55
SSBP4Q9BWG4 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
SSBP4Q9BWG4 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC11.62□□□□□ -0.55
SSBP4Q9BWG4 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC11.62□□□□□ -0.55
SSBP4Q9BWG4 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
SSBP4Q9BWG4 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
SSBP4Q9BWG4 AC004987.2-201ENST00000395959 1148 ntBASIC11.62□□□□□ -0.55
SSBP4Q9BWG4 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC11.62□□□□□ -0.55
SSBP4Q9BWG4 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC11.62□□□□□ -0.55
SSBP4Q9BWG4 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC11.62□□□□□ -0.55
SSBP4Q9BWG4 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC11.62□□□□□ -0.55
SSBP4Q9BWG4 HCG4P8-203ENST00000443049 980 ntBASIC11.62□□□□□ -0.55
SSBP4Q9BWG4 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC11.62□□□□□ -0.55
SSBP4Q9BWG4 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC11.62□□□□□ -0.55
SSBP4Q9BWG4 NDUFC1-211ENST00000544855 1257 ntAPPRIS P1 TSL 3 BASIC11.62□□□□□ -0.55
SSBP4Q9BWG4 Metazoa_SRP.12-201ENST00000553249 268 ntBASIC11.62□□□□□ -0.55
SSBP4Q9BWG4 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
SSBP4Q9BWG4 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC11.62□□□□□ -0.55
SSBP4Q9BWG4 TPM1-226ENST00000560959 925 ntTSL 2 BASIC11.62□□□□□ -0.55
SSBP4Q9BWG4 AC096734.2-201ENST00000562054 433 ntBASIC11.62□□□□□ -0.55
SSBP4Q9BWG4 MIR4751-201ENST00000578027 74 ntBASIC11.62□□□□□ -0.55
SSBP4Q9BWG4 AC024267.1-201ENST00000582320 895 ntBASIC11.62□□□□□ -0.55
SSBP4Q9BWG4 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC11.62□□□□□ -0.55
SSBP4Q9BWG4 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC11.62□□□□□ -0.55
SSBP4Q9BWG4 AC117500.6-201ENST00000624871 588 ntBASIC11.62□□□□□ -0.55
SSBP4Q9BWG4 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
SSBP4Q9BWG4 WDR24-201ENST00000248142 2763 ntTSL 5 BASIC11.62□□□□□ -0.55
SSBP4Q9BWG4 HES2-201ENST00000377834 4262 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
SSBP4Q9BWG4 HBP1-212ENST00000485846 2420 ntAPPRIS P1 TSL 2 BASIC11.62□□□□□ -0.55
SSBP4Q9BWG4 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
SSBP4Q9BWG4 LSS-211ENST00000522411 2523 ntTSL 2 BASIC11.62□□□□□ -0.55
SSBP4Q9BWG4 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
SSBP4Q9BWG4 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC11.62□□□□□ -0.55
SSBP4Q9BWG4 WASH3P-207ENST00000560956 1394 ntBASIC11.62□□□□□ -0.55
SSBP4Q9BWG4 FO538757.1-201ENST00000623083 1397 ntBASIC11.62□□□□□ -0.55
SSBP4Q9BWG4 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC11.62□□□□□ -0.55
SSBP4Q9BWG4 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
SSBP4Q9BWG4 MST1P2-201ENST00000457982 2291 ntBASIC11.62□□□□□ -0.55
SSBP4Q9BWG4 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
SSBP4Q9BWG4 AP4B1-201ENST00000256658 2742 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
SSBP4Q9BWG4 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
SSBP4Q9BWG4 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC11.62□□□□□ -0.55
SSBP4Q9BWG4 CARHSP1-216ENST00000610831 2841 ntAPPRIS P1 TSL 2 BASIC11.62□□□□□ -0.55
SSBP4Q9BWG4 CARHSP1-217ENST00000611932 2833 ntAPPRIS P1 TSL 3 BASIC11.62□□□□□ -0.55
SSBP4Q9BWG4 LGR5-201ENST00000266674 4611 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
SSBP4Q9BWG4 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
SSBP4Q9BWG4 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
SSBP4Q9BWG4 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC11.62□□□□□ -0.55
SSBP4Q9BWG4 SLC6A5-202ENST00000525748 7084 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
SSBP4Q9BWG4 KDR-201ENST00000263923 5831 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
SSBP4Q9BWG4 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC11.62□□□□□ -0.55
SSBP4Q9BWG4 NRP2-201ENST00000272849 5909 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
SSBP4Q9BWG4 GRIK4-208ENST00000638419 3593 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
SSBP4Q9BWG4 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
SSBP4Q9BWG4 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
SSBP4Q9BWG4 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC11.62□□□□□ -0.55
SSBP4Q9BWG4 NAA15-201ENST00000296543 6222 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
SSBP4Q9BWG4 SDC2-201ENST00000302190 3759 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
SSBP4Q9BWG4 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC11.62□□□□□ -0.55
SSBP4Q9BWG4 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
SSBP4Q9BWG4 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
SSBP4Q9BWG4 UBE3A-220ENST00000630424 5075 ntAPPRIS P3 TSL 5 BASIC11.61□□□□□ -0.55
SSBP4Q9BWG4 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
SSBP4Q9BWG4 DMBT1P1-203ENST00000636837 4628 ntBASIC11.61□□□□□ -0.55
SSBP4Q9BWG4 RNF44-201ENST00000274811 4155 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
SSBP4Q9BWG4 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC11.61□□□□□ -0.55
SSBP4Q9BWG4 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
SSBP4Q9BWG4 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
SSBP4Q9BWG4 SLC23A1-201ENST00000348729 2299 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
SSBP4Q9BWG4 BRPF1-205ENST00000433861 4304 ntTSL 2 BASIC11.61□□□□□ -0.55
SSBP4Q9BWG4 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC11.61□□□□□ -0.55
SSBP4Q9BWG4 PPT1-213ENST00000641319 2388 ntBASIC11.61□□□□□ -0.55
SSBP4Q9BWG4 CTCFL-205ENST00000423479 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
SSBP4Q9BWG4 PARP1-203ENST00000366794 3958 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
SSBP4Q9BWG4 ARHGEF33-202ENST00000409978 4484 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
SSBP4Q9BWG4 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC11.61□□□□□ -0.55
Retrieved 100 of 98,524 protein–RNA pairs in 68.6 ms