Protein–RNA interactions for Protein: Q96HS1

PGAM5, Serine/threonine-protein phosphatase PGAM5, mitochondrial, humanhuman

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGAM5Q96HS1 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC13.42□□□□□ -0.26
PGAM5Q96HS1 URGCP-206ENST00000446958 365 ntTSL 2 BASIC13.42□□□□□ -0.26
PGAM5Q96HS1 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC13.42□□□□□ -0.26
PGAM5Q96HS1 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC13.42□□□□□ -0.26
PGAM5Q96HS1 RAB35-202ENST00000534951 939 ntTSL 2 BASIC13.42□□□□□ -0.26
PGAM5Q96HS1 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC13.42□□□□□ -0.26
PGAM5Q96HS1 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC13.42□□□□□ -0.26
PGAM5Q96HS1 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC13.42□□□□□ -0.26
PGAM5Q96HS1 AL590560.3-201ENST00000623350 461 ntBASIC13.42□□□□□ -0.26
PGAM5Q96HS1 SERF2-217ENST00000630046 862 ntTSL 5 BASIC13.42□□□□□ -0.26
PGAM5Q96HS1 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
PGAM5Q96HS1 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC13.42□□□□□ -0.26
PGAM5Q96HS1 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
PGAM5Q96HS1 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
PGAM5Q96HS1 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC13.42□□□□□ -0.26
PGAM5Q96HS1 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
PGAM5Q96HS1 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC13.42□□□□□ -0.26
PGAM5Q96HS1 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
PGAM5Q96HS1 RERG-209ENST00000546331 1383 ntTSL 2 BASIC13.42□□□□□ -0.26
PGAM5Q96HS1 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC13.42□□□□□ -0.26
PGAM5Q96HS1 PCDHB16-201ENST00000609684 5001 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
PGAM5Q96HS1 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
PGAM5Q96HS1 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
PGAM5Q96HS1 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
PGAM5Q96HS1 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
PGAM5Q96HS1 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC13.42□□□□□ -0.26
PGAM5Q96HS1 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
PGAM5Q96HS1 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
PGAM5Q96HS1 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
PGAM5Q96HS1 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
PGAM5Q96HS1 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
PGAM5Q96HS1 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
PGAM5Q96HS1 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
PGAM5Q96HS1 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC13.41□□□□□ -0.26
PGAM5Q96HS1 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
PGAM5Q96HS1 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
PGAM5Q96HS1 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
PGAM5Q96HS1 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
PGAM5Q96HS1 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
PGAM5Q96HS1 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC13.41□□□□□ -0.26
PGAM5Q96HS1 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
PGAM5Q96HS1 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
PGAM5Q96HS1 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC13.41□□□□□ -0.26
PGAM5Q96HS1 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
PGAM5Q96HS1 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC13.41□□□□□ -0.26
PGAM5Q96HS1 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
PGAM5Q96HS1 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
PGAM5Q96HS1 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
PGAM5Q96HS1 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
PGAM5Q96HS1 UMODL1-204ENST00000400427 5442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
PGAM5Q96HS1 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC13.41□□□□□ -0.26
PGAM5Q96HS1 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
PGAM5Q96HS1 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC13.41□□□□□ -0.26
PGAM5Q96HS1 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
PGAM5Q96HS1 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC13.41□□□□□ -0.26
PGAM5Q96HS1 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
PGAM5Q96HS1 HLA-DRB6-201ENST00000411500 1235 ntBASIC13.41□□□□□ -0.26
PGAM5Q96HS1 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC13.41□□□□□ -0.26
PGAM5Q96HS1 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC13.41□□□□□ -0.26
PGAM5Q96HS1 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
PGAM5Q96HS1 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC13.41□□□□□ -0.26
PGAM5Q96HS1 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC13.41□□□□□ -0.26
PGAM5Q96HS1 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC13.41□□□□□ -0.26
PGAM5Q96HS1 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC13.41□□□□□ -0.26
PGAM5Q96HS1 ZNF890P-202ENST00000530367 1156 ntBASIC13.41□□□□□ -0.26
PGAM5Q96HS1 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
PGAM5Q96HS1 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
PGAM5Q96HS1 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC13.41□□□□□ -0.26
PGAM5Q96HS1 WDR88-203ENST00000592765 651 ntTSL 5 BASIC13.41□□□□□ -0.26
PGAM5Q96HS1 TEX48-202ENST00000612244 662 ntTSL 3 BASIC13.41□□□□□ -0.26
PGAM5Q96HS1 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC13.41□□□□□ -0.26
PGAM5Q96HS1 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC13.41□□□□□ -0.26
PGAM5Q96HS1 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
PGAM5Q96HS1 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
PGAM5Q96HS1 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
PGAM5Q96HS1 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC13.41□□□□□ -0.26
PGAM5Q96HS1 AC126335.2-201ENST00000623362 4637 ntBASIC13.41□□□□□ -0.26
PGAM5Q96HS1 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
PGAM5Q96HS1 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
PGAM5Q96HS1 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC13.41□□□□□ -0.26
PGAM5Q96HS1 REXO1L4P-201ENST00000605109 1937 ntBASIC13.41□□□□□ -0.26
PGAM5Q96HS1 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
PGAM5Q96HS1 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
PGAM5Q96HS1 PRDM10-204ENST00000423662 5998 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
PGAM5Q96HS1 B3GAT1-203ENST00000524765 5737 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
PGAM5Q96HS1 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
PGAM5Q96HS1 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
PGAM5Q96HS1 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
PGAM5Q96HS1 KRT18P28-201ENST00000453838 1332 ntBASIC13.4□□□□□ -0.26
PGAM5Q96HS1 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
PGAM5Q96HS1 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC13.4□□□□□ -0.26
PGAM5Q96HS1 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC13.4□□□□□ -0.26
PGAM5Q96HS1 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
PGAM5Q96HS1 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
PGAM5Q96HS1 COL4A3-202ENST00000396578 8097 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
PGAM5Q96HS1 GPSM2-202ENST00000406462 7433 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
PGAM5Q96HS1 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
PGAM5Q96HS1 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
PGAM5Q96HS1 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC13.4□□□□□ -0.26
PGAM5Q96HS1 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms