Protein–RNA interactions for Protein: Q6PIL6

KCNIP4, Kv channel-interacting protein 4, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP4Q6PIL6 COL3A1-201ENST00000304636 5543 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
KCNIP4Q6PIL6 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
KCNIP4Q6PIL6 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
KCNIP4Q6PIL6 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC11.88□□□□□ -0.51
KCNIP4Q6PIL6 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
KCNIP4Q6PIL6 RPL5P21-201ENST00000404620 815 ntBASIC11.88□□□□□ -0.51
KCNIP4Q6PIL6 COPS8-203ENST00000409334 794 ntTSL 5 BASIC11.88□□□□□ -0.51
KCNIP4Q6PIL6 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC11.88□□□□□ -0.51
KCNIP4Q6PIL6 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
KCNIP4Q6PIL6 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC11.88□□□□□ -0.51
KCNIP4Q6PIL6 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC11.88□□□□□ -0.51
KCNIP4Q6PIL6 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC11.88□□□□□ -0.51
KCNIP4Q6PIL6 PRELID1P1-202ENST00000567272 903 ntBASIC11.88□□□□□ -0.51
KCNIP4Q6PIL6 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC11.88□□□□□ -0.51
KCNIP4Q6PIL6 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
KCNIP4Q6PIL6 METTL23-204ENST00000586752 904 ntTSL 2 BASIC11.88□□□□□ -0.51
KCNIP4Q6PIL6 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
KCNIP4Q6PIL6 AC011467.4-201ENST00000594891 528 ntBASIC11.88□□□□□ -0.51
KCNIP4Q6PIL6 BSG-214ENST00000614867 960 ntTSL 3 BASIC11.88□□□□□ -0.51
KCNIP4Q6PIL6 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC11.88□□□□□ -0.51
KCNIP4Q6PIL6 GTF2I-215ENST00000614986 4415 ntAPPRIS ALT1 TSL 1 (best) BASIC11.88□□□□□ -0.51
KCNIP4Q6PIL6 GTF2I-221ENST00000621734 4412 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
KCNIP4Q6PIL6 TP53INP2-202ENST00000374810 4184 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
KCNIP4Q6PIL6 EIF4G1-205ENST00000382330 5129 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
KCNIP4Q6PIL6 PCDHB5-201ENST00000231134 3408 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
KCNIP4Q6PIL6 PDK2-203ENST00000503176 3440 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
KCNIP4Q6PIL6 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
KCNIP4Q6PIL6 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
KCNIP4Q6PIL6 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
KCNIP4Q6PIL6 NTRK3-AS1-201ENST00000569588 2663 ntTSL 2 BASIC11.88□□□□□ -0.51
KCNIP4Q6PIL6 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC11.88□□□□□ -0.51
KCNIP4Q6PIL6 MTMR4-204ENST00000579925 5622 ntTSL 5 BASIC11.88□□□□□ -0.51
KCNIP4Q6PIL6 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC11.88□□□□□ -0.51
KCNIP4Q6PIL6 MYH14-201ENST00000262269 3848 ntTSL 5 BASIC11.88□□□□□ -0.51
KCNIP4Q6PIL6 USP24-201ENST00000294383 10549 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
KCNIP4Q6PIL6 ACADM-218ENST00000541113 2535 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
KCNIP4Q6PIL6 TNFRSF11A-201ENST00000269485 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
KCNIP4Q6PIL6 GLB1L3-201ENST00000389887 3566 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
KCNIP4Q6PIL6 FOXK1-201ENST00000328914 11181 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
KCNIP4Q6PIL6 FLNA-204ENST00000369856 8241 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
KCNIP4Q6PIL6 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
KCNIP4Q6PIL6 GSE1-203ENST00000405402 4366 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
KCNIP4Q6PIL6 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
KCNIP4Q6PIL6 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
KCNIP4Q6PIL6 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
KCNIP4Q6PIL6 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
KCNIP4Q6PIL6 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
KCNIP4Q6PIL6 MARK1-201ENST00000366917 2946 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
KCNIP4Q6PIL6 TNRC6C-205ENST00000588061 8419 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
KCNIP4Q6PIL6 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC11.87□□□□□ -0.51
KCNIP4Q6PIL6 AC055811.4-201ENST00000624039 1754 ntBASIC11.87□□□□□ -0.51
KCNIP4Q6PIL6 CATSPERE-201ENST00000366531 3038 ntAPPRIS ALT2 TSL 2 BASIC11.87□□□□□ -0.51
KCNIP4Q6PIL6 SEPT6-201ENST00000343984 2693 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
KCNIP4Q6PIL6 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
KCNIP4Q6PIL6 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC11.87□□□□□ -0.51
KCNIP4Q6PIL6 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
KCNIP4Q6PIL6 CALML3-201ENST00000315238 2763 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
KCNIP4Q6PIL6 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC11.87□□□□□ -0.51
KCNIP4Q6PIL6 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
KCNIP4Q6PIL6 PNPLA5-205ENST00000597664 2537 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
KCNIP4Q6PIL6 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
KCNIP4Q6PIL6 AC018529.2-202ENST00000611482 3087 ntBASIC11.87□□□□□ -0.51
KCNIP4Q6PIL6 ABCA3-202ENST00000382381 6446 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
KCNIP4Q6PIL6 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
KCNIP4Q6PIL6 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
KCNIP4Q6PIL6 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
KCNIP4Q6PIL6 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
KCNIP4Q6PIL6 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
KCNIP4Q6PIL6 RAC2-202ENST00000401529 569 ntTSL 4 BASIC11.87□□□□□ -0.51
KCNIP4Q6PIL6 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC11.87□□□□□ -0.51
KCNIP4Q6PIL6 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC11.87□□□□□ -0.51
KCNIP4Q6PIL6 HCG4P8-203ENST00000443049 980 ntBASIC11.87□□□□□ -0.51
KCNIP4Q6PIL6 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC11.87□□□□□ -0.51
KCNIP4Q6PIL6 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC11.87□□□□□ -0.51
KCNIP4Q6PIL6 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
KCNIP4Q6PIL6 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC11.87□□□□□ -0.51
KCNIP4Q6PIL6 GZMM-202ENST00000592501 941 ntTSL 3 BASIC11.87□□□□□ -0.51
KCNIP4Q6PIL6 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
KCNIP4Q6PIL6 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC11.87□□□□□ -0.51
KCNIP4Q6PIL6 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC11.87□□□□□ -0.51
KCNIP4Q6PIL6 AF228730.7-201ENST00000641842 219 ntBASIC11.87□□□□□ -0.51
KCNIP4Q6PIL6 HOXA3-207ENST00000612286 3396 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
KCNIP4Q6PIL6 DGKD-202ENST00000409813 6228 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
KCNIP4Q6PIL6 FAM155A-201ENST00000375915 8503 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
KCNIP4Q6PIL6 C7orf57-204ENST00000435376 1925 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
KCNIP4Q6PIL6 C7orf57-206ENST00000539619 1927 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
KCNIP4Q6PIL6 NLRP13-201ENST00000342929 3132 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
KCNIP4Q6PIL6 LRP8-203ENST00000354412 2553 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
KCNIP4Q6PIL6 GNAS-215ENST00000371102 3438 ntTSL 5 BASIC11.87□□□□□ -0.51
KCNIP4Q6PIL6 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
KCNIP4Q6PIL6 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
KCNIP4Q6PIL6 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
KCNIP4Q6PIL6 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
KCNIP4Q6PIL6 ARID3B-206ENST00000622429 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
KCNIP4Q6PIL6 ITGB2-208ENST00000397857 2813 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
KCNIP4Q6PIL6 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC11.87□□□□□ -0.51
KCNIP4Q6PIL6 SLC27A4-201ENST00000300456 3028 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
KCNIP4Q6PIL6 AP000347.1-201ENST00000417194 5004 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
KCNIP4Q6PIL6 SFSWAP-210ENST00000541286 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
KCNIP4Q6PIL6 IRF6-204ENST00000542854 4256 ntTSL 2 BASIC11.86□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms