Protein–RNA interactions for Protein: Q04837

SSBP1, Single-stranded DNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1Q04837 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
SSBP1Q04837 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
SSBP1Q04837 RER1-207ENST00000488353 2469 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
SSBP1Q04837 CACNA1I-202ENST00000402142 10004 ntAPPRIS P4 TSL 1 (best) BASIC12.9□□□□□ -0.34
SSBP1Q04837 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
SSBP1Q04837 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC12.9□□□□□ -0.34
SSBP1Q04837 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
SSBP1Q04837 ADPRHL1-204ENST00000612156 9759 ntTSL 5 BASIC12.9□□□□□ -0.34
SSBP1Q04837 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
SSBP1Q04837 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
SSBP1Q04837 TMEM231-207ENST00000568377 2920 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
SSBP1Q04837 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC12.9□□□□□ -0.34
SSBP1Q04837 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
SSBP1Q04837 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
SSBP1Q04837 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
SSBP1Q04837 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
SSBP1Q04837 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
SSBP1Q04837 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC12.9□□□□□ -0.34
SSBP1Q04837 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC12.9□□□□□ -0.34
SSBP1Q04837 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
SSBP1Q04837 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC12.9□□□□□ -0.34
SSBP1Q04837 TFAMP1-201ENST00000412727 736 ntBASIC12.9□□□□□ -0.34
SSBP1Q04837 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC12.9□□□□□ -0.34
SSBP1Q04837 HIST3H2BA-201ENST00000436555 524 ntBASIC12.9□□□□□ -0.34
SSBP1Q04837 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC12.9□□□□□ -0.34
SSBP1Q04837 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC12.9□□□□□ -0.34
SSBP1Q04837 KRT18P21-201ENST00000515767 1272 ntBASIC12.9□□□□□ -0.34
SSBP1Q04837 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC12.9□□□□□ -0.34
SSBP1Q04837 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC12.9□□□□□ -0.34
SSBP1Q04837 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC12.9□□□□□ -0.34
SSBP1Q04837 KRT8P23-201ENST00000560090 1207 ntBASIC12.9□□□□□ -0.34
SSBP1Q04837 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC12.9□□□□□ -0.34
SSBP1Q04837 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
SSBP1Q04837 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC12.9□□□□□ -0.34
SSBP1Q04837 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC12.9□□□□□ -0.34
SSBP1Q04837 ARAP3-201ENST00000239440 5250 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
SSBP1Q04837 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC12.9□□□□□ -0.34
SSBP1Q04837 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
SSBP1Q04837 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
SSBP1Q04837 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC12.9□□□□□ -0.34
SSBP1Q04837 TMEM104-201ENST00000335464 4745 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
SSBP1Q04837 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
SSBP1Q04837 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
SSBP1Q04837 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
SSBP1Q04837 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
SSBP1Q04837 LSS-211ENST00000522411 2523 ntTSL 2 BASIC12.9□□□□□ -0.34
SSBP1Q04837 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC12.9□□□□□ -0.34
SSBP1Q04837 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
SSBP1Q04837 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.35
SSBP1Q04837 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC12.9□□□□□ -0.35
SSBP1Q04837 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC12.9□□□□□ -0.35
SSBP1Q04837 AC015909.5-201ENST00000624336 2266 ntBASIC12.9□□□□□ -0.35
SSBP1Q04837 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
SSBP1Q04837 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC12.89□□□□□ -0.35
SSBP1Q04837 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC12.89□□□□□ -0.35
SSBP1Q04837 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC12.89□□□□□ -0.35
SSBP1Q04837 AGBL3-202ENST00000435976 2495 ntTSL 5 BASIC12.89□□□□□ -0.35
SSBP1Q04837 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC12.89□□□□□ -0.35
SSBP1Q04837 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SSBP1Q04837 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
SSBP1Q04837 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
SSBP1Q04837 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
SSBP1Q04837 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC12.89□□□□□ -0.35
SSBP1Q04837 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SSBP1Q04837 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
SSBP1Q04837 AC073548.1-201ENST00000624088 1882 ntBASIC12.89□□□□□ -0.35
SSBP1Q04837 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SSBP1Q04837 CTBP1-AS2-206ENST00000581398 5652 ntBASIC12.89□□□□□ -0.35
SSBP1Q04837 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC12.89□□□□□ -0.35
SSBP1Q04837 ANO9-201ENST00000332826 2542 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SSBP1Q04837 C7orf57-203ENST00000430738 2056 ntTSL 5 BASIC12.89□□□□□ -0.35
SSBP1Q04837 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC12.89□□□□□ -0.35
SSBP1Q04837 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC12.89□□□□□ -0.35
SSBP1Q04837 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SSBP1Q04837 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
SSBP1Q04837 AFF3-202ENST00000409236 9849 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
SSBP1Q04837 HNRNPH1-203ENST00000393432 2279 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SSBP1Q04837 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
SSBP1Q04837 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
SSBP1Q04837 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC12.89□□□□□ -0.35
SSBP1Q04837 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
SSBP1Q04837 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC12.89□□□□□ -0.35
SSBP1Q04837 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC12.89□□□□□ -0.35
SSBP1Q04837 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC12.89□□□□□ -0.35
SSBP1Q04837 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SSBP1Q04837 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
SSBP1Q04837 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC12.89□□□□□ -0.35
SSBP1Q04837 PDPK2P-202ENST00000562415 1191 ntBASIC12.89□□□□□ -0.35
SSBP1Q04837 AC106730.1-201ENST00000566722 1090 ntBASIC12.89□□□□□ -0.35
SSBP1Q04837 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC12.89□□□□□ -0.35
SSBP1Q04837 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC12.89□□□□□ -0.35
SSBP1Q04837 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC12.89□□□□□ -0.35
SSBP1Q04837 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC12.89□□□□□ -0.35
SSBP1Q04837 AC027612.1-201ENST00000445234 2395 ntBASIC12.89□□□□□ -0.35
SSBP1Q04837 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC12.89□□□□□ -0.35
SSBP1Q04837 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
SSBP1Q04837 FSTL4-201ENST00000265342 5419 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
SSBP1Q04837 PRR30-201ENST00000335524 2008 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
SSBP1Q04837 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SSBP1Q04837 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 65.3 ms