Protein–RNA interactions for Protein: P98172

EFNB1, Ephrin-B1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB1P98172 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
EFNB1P98172 API5-203ENST00000455725 2257 ntTSL 2 BASIC13.59□□□□□ -0.23
EFNB1P98172 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
EFNB1P98172 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.23
EFNB1P98172 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC13.58□□□□□ -0.23
EFNB1P98172 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
EFNB1P98172 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
EFNB1P98172 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
EFNB1P98172 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC13.58□□□□□ -0.24
EFNB1P98172 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
EFNB1P98172 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC13.58□□□□□ -0.24
EFNB1P98172 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
EFNB1P98172 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
EFNB1P98172 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
EFNB1P98172 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.24
EFNB1P98172 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC13.58□□□□□ -0.24
EFNB1P98172 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC13.58□□□□□ -0.24
EFNB1P98172 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
EFNB1P98172 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
EFNB1P98172 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
EFNB1P98172 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
EFNB1P98172 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
EFNB1P98172 MPV17-208ENST00000405076 603 ntTSL 5 BASIC13.58□□□□□ -0.24
EFNB1P98172 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC13.58□□□□□ -0.24
EFNB1P98172 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
EFNB1P98172 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC13.58□□□□□ -0.24
EFNB1P98172 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
EFNB1P98172 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC13.58□□□□□ -0.24
EFNB1P98172 AC023141.5-201ENST00000458585 616 ntBASIC13.58□□□□□ -0.24
EFNB1P98172 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC13.58□□□□□ -0.24
EFNB1P98172 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC13.58□□□□□ -0.24
EFNB1P98172 ZNF890P-202ENST00000530367 1156 ntBASIC13.58□□□□□ -0.24
EFNB1P98172 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC13.58□□□□□ -0.24
EFNB1P98172 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC13.58□□□□□ -0.24
EFNB1P98172 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
EFNB1P98172 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC13.58□□□□□ -0.24
EFNB1P98172 METTL23-205ENST00000588302 925 ntTSL 5 BASIC13.58□□□□□ -0.24
EFNB1P98172 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
EFNB1P98172 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
EFNB1P98172 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC13.58□□□□□ -0.24
EFNB1P98172 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
EFNB1P98172 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
EFNB1P98172 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
EFNB1P98172 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
EFNB1P98172 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC13.58□□□□□ -0.24
EFNB1P98172 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
EFNB1P98172 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
EFNB1P98172 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
EFNB1P98172 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
EFNB1P98172 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.24
EFNB1P98172 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.24
EFNB1P98172 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC13.57□□□□□ -0.24
EFNB1P98172 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
EFNB1P98172 BRSK2-202ENST00000382179 3576 ntTSL 2 BASIC13.57□□□□□ -0.24
EFNB1P98172 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
EFNB1P98172 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC13.57□□□□□ -0.24
EFNB1P98172 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC13.57□□□□□ -0.24
EFNB1P98172 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC13.57□□□□□ -0.24
EFNB1P98172 AC105206.1-202ENST00000314927 2368 ntBASIC13.57□□□□□ -0.24
EFNB1P98172 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
EFNB1P98172 AC020910.6-201ENST00000623084 1459 ntBASIC13.57□□□□□ -0.24
EFNB1P98172 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
EFNB1P98172 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC13.57□□□□□ -0.24
EFNB1P98172 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC13.57□□□□□ -0.24
EFNB1P98172 CENPM-205ENST00000404067 905 ntTSL 3 BASIC13.57□□□□□ -0.24
EFNB1P98172 CENPM-206ENST00000407253 818 ntTSL 2 BASIC13.57□□□□□ -0.24
EFNB1P98172 AL353779.1-201ENST00000434793 351 ntBASIC13.57□□□□□ -0.24
EFNB1P98172 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
EFNB1P98172 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC13.57□□□□□ -0.24
EFNB1P98172 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC13.57□□□□□ -0.24
EFNB1P98172 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC13.57□□□□□ -0.24
EFNB1P98172 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC13.57□□□□□ -0.24
EFNB1P98172 AC069262.1-201ENST00000539058 672 ntBASIC13.57□□□□□ -0.24
EFNB1P98172 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
EFNB1P98172 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC13.57□□□□□ -0.24
EFNB1P98172 AC092337.1-201ENST00000568699 1129 ntBASIC13.57□□□□□ -0.24
EFNB1P98172 HOTTIP_1.1-201ENST00000620415 57 ntBASIC13.57□□□□□ -0.24
EFNB1P98172 AC004461.2-201ENST00000629517 803 ntBASIC13.57□□□□□ -0.24
EFNB1P98172 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC13.57□□□□□ -0.24
EFNB1P98172 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
EFNB1P98172 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
EFNB1P98172 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
EFNB1P98172 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
EFNB1P98172 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC13.57□□□□□ -0.24
EFNB1P98172 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC13.57□□□□□ -0.24
EFNB1P98172 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
EFNB1P98172 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
EFNB1P98172 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC13.57□□□□□ -0.24
EFNB1P98172 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
EFNB1P98172 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
EFNB1P98172 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
EFNB1P98172 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
EFNB1P98172 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC13.57□□□□□ -0.24
EFNB1P98172 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
EFNB1P98172 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
EFNB1P98172 AC012617.1-204ENST00000586340 2305 ntBASIC13.57□□□□□ -0.24
EFNB1P98172 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
EFNB1P98172 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
EFNB1P98172 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
EFNB1P98172 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC13.57□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms