Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC17.15■□□□□ 0.34
TPM4P67936 SLC9A7P1-202ENST00000556476 2239 ntBASIC17.15■□□□□ 0.34
TPM4P67936 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC17.14■□□□□ 0.34
TPM4P67936 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC17.14■□□□□ 0.34
TPM4P67936 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
TPM4P67936 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TPM4P67936 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC17.14■□□□□ 0.33
TPM4P67936 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TPM4P67936 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
TPM4P67936 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TPM4P67936 SF1-209ENST00000433274 2317 ntTSL 2 BASIC17.14■□□□□ 0.33
TPM4P67936 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TPM4P67936 VAPA-202ENST00000400000 6815 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TPM4P67936 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TPM4P67936 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC17.14■□□□□ 0.33
TPM4P67936 AC136759.1-202ENST00000530858 2194 ntBASIC17.14■□□□□ 0.33
TPM4P67936 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TPM4P67936 RPS19-201ENST00000221975 500 ntTSL 3 BASIC17.14■□□□□ 0.33
TPM4P67936 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
TPM4P67936 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC17.14■□□□□ 0.33
TPM4P67936 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
TPM4P67936 RBM39-205ENST00000397370 612 ntTSL 2 BASIC17.14■□□□□ 0.33
TPM4P67936 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC17.14■□□□□ 0.33
TPM4P67936 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC17.14■□□□□ 0.33
TPM4P67936 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC17.14■□□□□ 0.33
TPM4P67936 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TPM4P67936 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TPM4P67936 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC17.14■□□□□ 0.33
TPM4P67936 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC17.14■□□□□ 0.33
TPM4P67936 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC17.14■□□□□ 0.33
TPM4P67936 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TPM4P67936 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
TPM4P67936 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TPM4P67936 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TPM4P67936 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TPM4P67936 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TPM4P67936 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC17.14■□□□□ 0.33
TPM4P67936 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
TPM4P67936 GALNT4-201ENST00000529983 5399 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
TPM4P67936 CDH3-201ENST00000264012 4929 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TPM4P67936 USP49-203ENST00000394253 9034 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
TPM4P67936 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TPM4P67936 GRAMD4-202ENST00000406902 4484 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TPM4P67936 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TPM4P67936 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC17.14■□□□□ 0.33
TPM4P67936 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC17.14■□□□□ 0.33
TPM4P67936 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC17.14■□□□□ 0.33
TPM4P67936 AL359183.1-201ENST00000623796 2132 ntBASIC17.14■□□□□ 0.33
TPM4P67936 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TPM4P67936 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TPM4P67936 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC17.13■□□□□ 0.33
TPM4P67936 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
TPM4P67936 REXO1L4P-201ENST00000605109 1937 ntBASIC17.13■□□□□ 0.33
TPM4P67936 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
TPM4P67936 NOL9-201ENST00000377705 6649 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TPM4P67936 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC17.13■□□□□ 0.33
TPM4P67936 FEM1A-201ENST00000269856 9593 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
TPM4P67936 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC17.13■□□□□ 0.33
TPM4P67936 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
TPM4P67936 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
TPM4P67936 SLC9A8-201ENST00000361573 6094 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TPM4P67936 GMPPB-203ENST00000480687 6108 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
TPM4P67936 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TPM4P67936 ABCA2-201ENST00000265662 8154 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
TPM4P67936 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC17.13■□□□□ 0.33
TPM4P67936 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TPM4P67936 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TPM4P67936 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TPM4P67936 MED15P5-201ENST00000423150 992 ntBASIC17.13■□□□□ 0.33
TPM4P67936 AL592309.1-201ENST00000443127 649 ntBASIC17.13■□□□□ 0.33
TPM4P67936 KRT18P3-201ENST00000451602 1288 ntBASIC17.13■□□□□ 0.33
TPM4P67936 SLED1-202ENST00000512051 380 ntBASIC17.13■□□□□ 0.33
TPM4P67936 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
TPM4P67936 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
TPM4P67936 AC027601.4-201ENST00000611259 610 ntBASIC17.13■□□□□ 0.33
TPM4P67936 CITED2-204ENST00000618718 901 ntTSL 2 BASIC17.13■□□□□ 0.33
TPM4P67936 MEGF8-201ENST00000251268 9549 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
TPM4P67936 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TPM4P67936 RIMBP2-201ENST00000261655 6321 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TPM4P67936 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC17.13■□□□□ 0.33
TPM4P67936 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TPM4P67936 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TPM4P67936 DNAJC22-202ENST00000549441 4412 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
TPM4P67936 SLC35E2B-205ENST00000617444 6283 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TPM4P67936 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC17.13■□□□□ 0.33
TPM4P67936 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
TPM4P67936 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TPM4P67936 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TPM4P67936 TMEM2-202ENST00000377044 6523 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
TPM4P67936 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC17.12■□□□□ 0.33
TPM4P67936 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC17.12■□□□□ 0.33
TPM4P67936 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
TPM4P67936 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC17.12■□□□□ 0.33
TPM4P67936 CA12-201ENST00000178638 6413 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
TPM4P67936 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TPM4P67936 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TPM4P67936 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
TPM4P67936 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC17.12■□□□□ 0.33
TPM4P67936 WWTR1-203ENST00000465804 5030 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
TPM4P67936 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms