Protein–RNA interactions for Protein: P29973

CNGA1, cGMP-gated cation channel alpha-1, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1P29973 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
CNGA1P29973 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
CNGA1P29973 KRT8P4-201ENST00000509735 1454 ntBASIC17.31■□□□□ 0.36
CNGA1P29973 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CNGA1P29973 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC17.3■□□□□ 0.36
CNGA1P29973 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC17.3■□□□□ 0.36
CNGA1P29973 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC17.3■□□□□ 0.36
CNGA1P29973 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
CNGA1P29973 HLA-DQB2-231ENST00000435145 2026 ntBASIC17.3■□□□□ 0.36
CNGA1P29973 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CNGA1P29973 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CNGA1P29973 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC17.3■□□□□ 0.36
CNGA1P29973 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC17.3■□□□□ 0.36
CNGA1P29973 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CNGA1P29973 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
CNGA1P29973 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
CNGA1P29973 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC17.3■□□□□ 0.36
CNGA1P29973 CAMKMT-203ENST00000403853 1114 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CNGA1P29973 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CNGA1P29973 DLGAP4-AS1-202ENST00000433238 593 ntTSL 3 BASIC17.3■□□□□ 0.36
CNGA1P29973 PTPA-217ENST00000434095 870 ntTSL 2 BASIC17.3■□□□□ 0.36
CNGA1P29973 LYRM4-206ENST00000468929 1168 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CNGA1P29973 SDHD-202ENST00000525291 790 ntTSL 3 BASIC17.3■□□□□ 0.36
CNGA1P29973 TMBIM4-205ENST00000535812 766 ntTSL 4 BASIC17.3■□□□□ 0.36
CNGA1P29973 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC17.3■□□□□ 0.36
CNGA1P29973 TMBIM4-212ENST00000556010 610 ntTSL 5 BASIC17.3■□□□□ 0.36
CNGA1P29973 OR10B1P-201ENST00000601666 907 ntBASIC17.3■□□□□ 0.36
CNGA1P29973 AC128714.1-201ENST00000637035 887 ntBASIC17.3■□□□□ 0.36
CNGA1P29973 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CNGA1P29973 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC17.3■□□□□ 0.36
CNGA1P29973 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CNGA1P29973 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC17.3■□□□□ 0.36
CNGA1P29973 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CNGA1P29973 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CNGA1P29973 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CNGA1P29973 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
CNGA1P29973 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
CNGA1P29973 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC17.3■□□□□ 0.36
CNGA1P29973 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC17.3■□□□□ 0.36
CNGA1P29973 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC17.3■□□□□ 0.36
CNGA1P29973 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
CNGA1P29973 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CNGA1P29973 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CNGA1P29973 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
CNGA1P29973 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CNGA1P29973 WARS-232ENST00000556645 2508 ntTSL 5 BASIC17.29■□□□□ 0.36
CNGA1P29973 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
CNGA1P29973 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
CNGA1P29973 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
CNGA1P29973 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC17.29■□□□□ 0.36
CNGA1P29973 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC17.29■□□□□ 0.36
CNGA1P29973 AC092127.1-201ENST00000567093 3455 ntBASIC17.29■□□□□ 0.36
CNGA1P29973 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC17.29■□□□□ 0.36
CNGA1P29973 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CNGA1P29973 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CNGA1P29973 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
CNGA1P29973 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
CNGA1P29973 AL136361.1-201ENST00000435429 506 ntTSL 3 BASIC17.29■□□□□ 0.36
CNGA1P29973 RPS2P36-201ENST00000456516 831 ntBASIC17.29■□□□□ 0.36
CNGA1P29973 LY6G6C-202ENST00000495859 937 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CNGA1P29973 LEF1-AS1-204ENST00000508266 559 ntTSL 4 BASIC17.29■□□□□ 0.36
CNGA1P29973 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC17.29■□□□□ 0.36
CNGA1P29973 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
CNGA1P29973 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC17.29■□□□□ 0.36
CNGA1P29973 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
CNGA1P29973 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CNGA1P29973 MFF-204ENST00000353339 2186 ntTSL 5 BASIC17.29■□□□□ 0.36
CNGA1P29973 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CNGA1P29973 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC17.29■□□□□ 0.36
CNGA1P29973 BANP-201ENST00000286122 2368 ntTSL 5 BASIC17.29■□□□□ 0.36
CNGA1P29973 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC17.29■□□□□ 0.36
CNGA1P29973 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
CNGA1P29973 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CNGA1P29973 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CNGA1P29973 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
CNGA1P29973 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC17.28■□□□□ 0.36
CNGA1P29973 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CNGA1P29973 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CNGA1P29973 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC17.28■□□□□ 0.36
CNGA1P29973 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CNGA1P29973 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
CNGA1P29973 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC17.28■□□□□ 0.36
CNGA1P29973 UBE2V2-205ENST00000521346 1322 ntTSL 3 BASIC17.28■□□□□ 0.36
CNGA1P29973 ILF3-AS1-201ENST00000591501 1983 ntBASIC17.28■□□□□ 0.36
CNGA1P29973 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CNGA1P29973 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC17.28■□□□□ 0.36
CNGA1P29973 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CNGA1P29973 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC17.28■□□□□ 0.36
CNGA1P29973 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CNGA1P29973 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CNGA1P29973 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
CNGA1P29973 CSNK2B-201ENST00000375865 908 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
CNGA1P29973 AL139094.1-201ENST00000405549 1188 ntBASIC17.28■□□□□ 0.36
CNGA1P29973 TMEM198B-204ENST00000484016 896 ntBASIC17.28■□□□□ 0.36
CNGA1P29973 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC17.28■□□□□ 0.36
CNGA1P29973 TMEM91-211ENST00000544232 725 ntTSL 3 BASIC17.28■□□□□ 0.36
CNGA1P29973 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC17.28■□□□□ 0.36
CNGA1P29973 FGFR3P5-201ENST00000564496 886 ntBASIC17.28■□□□□ 0.36
CNGA1P29973 MFSD11-218ENST00000591864 446 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CNGA1P29973 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 52.8 ms