Protein–RNA interactions for Protein: P16333

NCK1, Cytoplasmic protein NCK1, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1P16333 AC007787.1-201ENST00000588095 1583 ntBASIC14.46□□□□□ -0.09
NCK1P16333 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
NCK1P16333 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC14.46□□□□□ -0.1
NCK1P16333 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.1
NCK1P16333 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC14.46□□□□□ -0.1
NCK1P16333 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC14.46□□□□□ -0.1
NCK1P16333 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.1
NCK1P16333 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
NCK1P16333 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.1
NCK1P16333 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
NCK1P16333 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
NCK1P16333 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC14.46□□□□□ -0.1
NCK1P16333 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC14.46□□□□□ -0.1
NCK1P16333 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
NCK1P16333 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC14.46□□□□□ -0.1
NCK1P16333 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
NCK1P16333 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
NCK1P16333 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
NCK1P16333 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
NCK1P16333 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC14.45□□□□□ -0.1
NCK1P16333 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
NCK1P16333 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC14.45□□□□□ -0.1
NCK1P16333 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
NCK1P16333 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
NCK1P16333 AC089987.1-201ENST00000551654 2209 ntBASIC14.45□□□□□ -0.1
NCK1P16333 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
NCK1P16333 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
NCK1P16333 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
NCK1P16333 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
NCK1P16333 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
NCK1P16333 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
NCK1P16333 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
NCK1P16333 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
NCK1P16333 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC14.45□□□□□ -0.1
NCK1P16333 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC14.45□□□□□ -0.1
NCK1P16333 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC14.45□□□□□ -0.1
NCK1P16333 AL592309.1-201ENST00000443127 649 ntBASIC14.45□□□□□ -0.1
NCK1P16333 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC14.45□□□□□ -0.1
NCK1P16333 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC14.45□□□□□ -0.1
NCK1P16333 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
NCK1P16333 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
NCK1P16333 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC14.45□□□□□ -0.1
NCK1P16333 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
NCK1P16333 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC14.45□□□□□ -0.1
NCK1P16333 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
NCK1P16333 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
NCK1P16333 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
NCK1P16333 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC14.45□□□□□ -0.1
NCK1P16333 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
NCK1P16333 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC14.45□□□□□ -0.1
NCK1P16333 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
NCK1P16333 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
NCK1P16333 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
NCK1P16333 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC14.45□□□□□ -0.1
NCK1P16333 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
NCK1P16333 MBLAC2-202ENST00000514906 1936 ntBASIC14.45□□□□□ -0.1
NCK1P16333 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
NCK1P16333 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
NCK1P16333 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
NCK1P16333 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC14.44□□□□□ -0.1
NCK1P16333 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
NCK1P16333 ZBTB45P1-201ENST00000452761 1456 ntBASIC14.44□□□□□ -0.1
NCK1P16333 STK32B-201ENST00000282908 3582 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
NCK1P16333 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC14.44□□□□□ -0.1
NCK1P16333 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC14.44□□□□□ -0.1
NCK1P16333 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC14.44□□□□□ -0.1
NCK1P16333 DENND1B-211ENST00000620048 8378 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
NCK1P16333 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC14.44□□□□□ -0.1
NCK1P16333 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
NCK1P16333 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
NCK1P16333 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
NCK1P16333 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
NCK1P16333 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC14.44□□□□□ -0.1
NCK1P16333 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC14.44□□□□□ -0.1
NCK1P16333 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
NCK1P16333 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
NCK1P16333 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
NCK1P16333 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
NCK1P16333 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC14.44□□□□□ -0.1
NCK1P16333 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
NCK1P16333 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC14.44□□□□□ -0.1
NCK1P16333 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC14.44□□□□□ -0.1
NCK1P16333 PFN2-205ENST00000461868 613 ntTSL 2 BASIC14.44□□□□□ -0.1
NCK1P16333 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
NCK1P16333 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC14.44□□□□□ -0.1
NCK1P16333 GATB-205ENST00000508611 605 ntTSL 2 BASIC14.44□□□□□ -0.1
NCK1P16333 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC14.44□□□□□ -0.1
NCK1P16333 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC14.44□□□□□ -0.1
NCK1P16333 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC14.44□□□□□ -0.1
NCK1P16333 AC025181.2-201ENST00000606994 802 ntBASIC14.44□□□□□ -0.1
NCK1P16333 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC14.44□□□□□ -0.1
NCK1P16333 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC14.44□□□□□ -0.1
NCK1P16333 AC084121.4-201ENST00000641598 221 ntBASIC14.44□□□□□ -0.1
NCK1P16333 AF228730.8-201ENST00000642140 221 ntBASIC14.44□□□□□ -0.1
NCK1P16333 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC14.44□□□□□ -0.1
NCK1P16333 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC14.44□□□□□ -0.1
NCK1P16333 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
NCK1P16333 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
NCK1P16333 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
NCK1P16333 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms