Protein–RNA interactions for Protein: O15439

ABCC4, Multidrug resistance-associated protein 4, humanhuman

Predictions only

Length 1,325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCC4O15439 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
ABCC4O15439 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ABCC4O15439 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC19.23■□□□□ 0.67
ABCC4O15439 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
ABCC4O15439 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC19.23■□□□□ 0.67
ABCC4O15439 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
ABCC4O15439 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ABCC4O15439 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ABCC4O15439 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ABCC4O15439 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ABCC4O15439 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
ABCC4O15439 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
ABCC4O15439 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ABCC4O15439 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
ABCC4O15439 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC19.23■□□□□ 0.67
ABCC4O15439 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC19.23■□□□□ 0.67
ABCC4O15439 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
ABCC4O15439 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
ABCC4O15439 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
ABCC4O15439 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
ABCC4O15439 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ABCC4O15439 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ABCC4O15439 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ABCC4O15439 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
ABCC4O15439 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
ABCC4O15439 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC19.23■□□□□ 0.67
ABCC4O15439 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ABCC4O15439 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
ABCC4O15439 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC19.23■□□□□ 0.67
ABCC4O15439 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
ABCC4O15439 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC19.23■□□□□ 0.67
ABCC4O15439 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC19.23■□□□□ 0.67
ABCC4O15439 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC19.23■□□□□ 0.67
ABCC4O15439 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
ABCC4O15439 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC19.23■□□□□ 0.67
ABCC4O15439 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC19.23■□□□□ 0.67
ABCC4O15439 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
ABCC4O15439 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ABCC4O15439 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
ABCC4O15439 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC19.23■□□□□ 0.67
ABCC4O15439 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC19.23■□□□□ 0.67
ABCC4O15439 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ABCC4O15439 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
ABCC4O15439 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
ABCC4O15439 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
ABCC4O15439 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC19.22■□□□□ 0.67
ABCC4O15439 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ABCC4O15439 AHCYP2-201ENST00000430630 1300 ntBASIC19.22■□□□□ 0.67
ABCC4O15439 AC055811.4-201ENST00000624039 1754 ntBASIC19.22■□□□□ 0.67
ABCC4O15439 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
ABCC4O15439 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
ABCC4O15439 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
ABCC4O15439 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
ABCC4O15439 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC19.22■□□□□ 0.67
ABCC4O15439 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
ABCC4O15439 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
ABCC4O15439 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
ABCC4O15439 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
ABCC4O15439 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
ABCC4O15439 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ABCC4O15439 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC19.22■□□□□ 0.67
ABCC4O15439 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
ABCC4O15439 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ABCC4O15439 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
ABCC4O15439 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
ABCC4O15439 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ABCC4O15439 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ABCC4O15439 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
ABCC4O15439 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ABCC4O15439 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
ABCC4O15439 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC19.22■□□□□ 0.67
ABCC4O15439 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
ABCC4O15439 MIR1202-201ENST00000408529 83 ntBASIC19.22■□□□□ 0.67
ABCC4O15439 AL591846.1-201ENST00000451736 433 ntBASIC19.22■□□□□ 0.67
ABCC4O15439 AC104306.2-201ENST00000451877 341 ntBASIC19.22■□□□□ 0.67
ABCC4O15439 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
ABCC4O15439 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC19.22■□□□□ 0.67
ABCC4O15439 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
ABCC4O15439 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC19.22■□□□□ 0.67
ABCC4O15439 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ABCC4O15439 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC19.22■□□□□ 0.67
ABCC4O15439 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC19.22■□□□□ 0.67
ABCC4O15439 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
ABCC4O15439 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
ABCC4O15439 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
ABCC4O15439 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ABCC4O15439 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC19.21■□□□□ 0.67
ABCC4O15439 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
ABCC4O15439 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
ABCC4O15439 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
ABCC4O15439 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
ABCC4O15439 MCHR2-202ENST00000369212 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ABCC4O15439 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
ABCC4O15439 CALM1-216ENST00000626705 1341 ntTSL 5 BASIC19.21■□□□□ 0.67
ABCC4O15439 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
ABCC4O15439 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ABCC4O15439 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC19.21■□□□□ 0.67
ABCC4O15439 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ABCC4O15439 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
ABCC4O15439 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms