Protein–RNA interactions for Protein: O14817

TSPAN4, Tetraspanin-4, humanhuman

Predictions only

Length 238 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4O14817 ACOX1-201ENST00000293217 7514 ntAPPRIS P5 TSL 1 (best) BASIC12.94□□□□□ -0.34
TSPAN4O14817 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
TSPAN4O14817 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
TSPAN4O14817 TPM3P9-201ENST00000424846 2920 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
TSPAN4O14817 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
TSPAN4O14817 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC12.94□□□□□ -0.34
TSPAN4O14817 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
TSPAN4O14817 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
TSPAN4O14817 LRRC20-201ENST00000355790 3414 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
TSPAN4O14817 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
TSPAN4O14817 GDPD5-209ENST00000529721 3222 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
TSPAN4O14817 DNM3-202ENST00000367731 7613 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
TSPAN4O14817 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
TSPAN4O14817 PATL2-207ENST00000560775 1913 ntAPPRIS P3 TSL 5 BASIC12.94□□□□□ -0.34
TSPAN4O14817 COL6A3-203ENST00000353578 9963 ntTSL 5 BASIC12.94□□□□□ -0.34
TSPAN4O14817 FUK-202ENST00000378912 3925 ntTSL 2 BASIC12.94□□□□□ -0.34
TSPAN4O14817 MATN1-AS1-201ENST00000414532 3925 ntTSL 2 BASIC12.94□□□□□ -0.34
TSPAN4O14817 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
TSPAN4O14817 ADAM33-207ENST00000619289 3195 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
TSPAN4O14817 DHX38-201ENST00000268482 4608 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TSPAN4O14817 CMIP-208ENST00000566462 3512 ntTSL 4 BASIC12.93□□□□□ -0.34
TSPAN4O14817 EBF3-201ENST00000355311 2993 ntAPPRIS ALT1 TSL 5 BASIC12.93□□□□□ -0.34
TSPAN4O14817 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
TSPAN4O14817 REXO1L8P-201ENST00000604378 1897 ntBASIC12.93□□□□□ -0.34
TSPAN4O14817 HJURP-207ENST00000441687 2934 ntAPPRIS ALT2 TSL 2 BASIC12.93□□□□□ -0.34
TSPAN4O14817 C10orf71-201ENST00000374144 5230 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TSPAN4O14817 AL590787.1-201ENST00000568856 1315 ntBASIC12.93□□□□□ -0.34
TSPAN4O14817 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
TSPAN4O14817 LPO-203ENST00000421678 2729 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
TSPAN4O14817 ADGRA1-201ENST00000392606 3438 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
TSPAN4O14817 GRIA4-201ENST00000282499 5508 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
TSPAN4O14817 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
TSPAN4O14817 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TSPAN4O14817 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
TSPAN4O14817 MOGAT3-201ENST00000223114 2132 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
TSPAN4O14817 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TSPAN4O14817 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TSPAN4O14817 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TSPAN4O14817 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TSPAN4O14817 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
TSPAN4O14817 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
TSPAN4O14817 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC12.93□□□□□ -0.34
TSPAN4O14817 RNA5SP419-201ENST00000515908 135 ntBASIC12.93□□□□□ -0.34
TSPAN4O14817 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC12.93□□□□□ -0.34
TSPAN4O14817 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC12.93□□□□□ -0.34
TSPAN4O14817 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC12.93□□□□□ -0.34
TSPAN4O14817 CYGB-205ENST00000590175 830 ntTSL 3 BASIC12.93□□□□□ -0.34
TSPAN4O14817 AL356488.2-201ENST00000602755 427 ntBASIC12.93□□□□□ -0.34
TSPAN4O14817 MIR7706-201ENST00000613747 67 ntBASIC12.93□□□□□ -0.34
TSPAN4O14817 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC12.93□□□□□ -0.34
TSPAN4O14817 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC12.93□□□□□ -0.34
TSPAN4O14817 AC005593.1-201ENST00000624894 515 ntBASIC12.93□□□□□ -0.34
TSPAN4O14817 DNM1-213ENST00000628346 3835 ntAPPRIS ALT1 TSL 5 BASIC12.93□□□□□ -0.34
TSPAN4O14817 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC12.93□□□□□ -0.34
TSPAN4O14817 AL805961.1-202ENST00000641562 540 ntBASIC12.93□□□□□ -0.34
TSPAN4O14817 NUP153-203ENST00000613258 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
TSPAN4O14817 GPC4-201ENST00000370828 4960 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TSPAN4O14817 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
TSPAN4O14817 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
TSPAN4O14817 TLL2-201ENST00000357947 6756 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TSPAN4O14817 KIAA0513-201ENST00000258180 7404 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
TSPAN4O14817 RNF43-208ENST00000584437 5575 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TSPAN4O14817 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC12.93□□□□□ -0.34
TSPAN4O14817 AL358334.2-201ENST00000553648 4714 ntTSL 2 BASIC12.93□□□□□ -0.34
TSPAN4O14817 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
TSPAN4O14817 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
TSPAN4O14817 RGMA-203ENST00000542321 3038 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
TSPAN4O14817 MAPT-IT1-201ENST00000624111 3016 ntBASIC12.93□□□□□ -0.34
TSPAN4O14817 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
TSPAN4O14817 ADAM17-203ENST00000497134 1873 ntTSL 5 BASIC12.93□□□□□ -0.34
TSPAN4O14817 ZNF200-205ENST00000431561 3348 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
TSPAN4O14817 ZNF71-201ENST00000328070 5428 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TSPAN4O14817 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
TSPAN4O14817 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TSPAN4O14817 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC12.93□□□□□ -0.34
TSPAN4O14817 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
TSPAN4O14817 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
TSPAN4O14817 CCDC88C-201ENST00000331194 3104 ntTSL 5 BASIC12.93□□□□□ -0.34
TSPAN4O14817 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TSPAN4O14817 SMC4-202ENST00000357388 5471 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
TSPAN4O14817 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC12.92□□□□□ -0.34
TSPAN4O14817 ZHX1-202ENST00000395571 5108 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
TSPAN4O14817 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC12.92□□□□□ -0.34
TSPAN4O14817 BEND3P3-201ENST00000611030 2440 ntBASIC12.92□□□□□ -0.34
TSPAN4O14817 SNED1-201ENST00000310397 8174 ntAPPRIS P2 TSL 5 BASIC12.92□□□□□ -0.34
TSPAN4O14817 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
TSPAN4O14817 KIF3C-202ENST00000405914 3180 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
TSPAN4O14817 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
TSPAN4O14817 SERBP1-204ENST00000370995 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
TSPAN4O14817 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC12.92□□□□□ -0.34
TSPAN4O14817 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC12.92□□□□□ -0.34
TSPAN4O14817 GFAP-214ENST00000588735 6538 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
TSPAN4O14817 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
TSPAN4O14817 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
TSPAN4O14817 C18orf15-201ENST00000623680 2534 ntBASIC12.92□□□□□ -0.34
TSPAN4O14817 MADD-203ENST00000349238 5873 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
TSPAN4O14817 RBM10-202ENST00000345781 3108 ntAPPRIS ALT2 TSL 2 BASIC12.92□□□□□ -0.34
TSPAN4O14817 PLCB3-201ENST00000279230 4197 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
TSPAN4O14817 MIER2-201ENST00000264819 6884 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
TSPAN4O14817 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms