Protein–RNA interactions for Protein: A6NNA2

SRRM3, Serine/arginine repetitive matrix protein 3, humanhuman

Predicted RBP Predictions only

Length 597 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM3A6NNA2 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SRRM3A6NNA2 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC15.86■□□□□ 0.13
SRRM3A6NNA2 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC15.86■□□□□ 0.13
SRRM3A6NNA2 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC15.86■□□□□ 0.13
SRRM3A6NNA2 AC093724.1-201ENST00000448659 1027 ntBASIC15.86■□□□□ 0.13
SRRM3A6NNA2 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
SRRM3A6NNA2 SATB1-217ENST00000493952 626 ntTSL 3 BASIC15.86■□□□□ 0.13
SRRM3A6NNA2 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
SRRM3A6NNA2 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC15.86■□□□□ 0.13
SRRM3A6NNA2 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
SRRM3A6NNA2 MIR4313-201ENST00000580760 101 ntBASIC15.86■□□□□ 0.13
SRRM3A6NNA2 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC15.86■□□□□ 0.13
SRRM3A6NNA2 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SRRM3A6NNA2 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC15.86■□□□□ 0.13
SRRM3A6NNA2 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
SRRM3A6NNA2 AC018529.1-201ENST00000613063 361 ntBASIC15.86■□□□□ 0.13
SRRM3A6NNA2 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC15.86■□□□□ 0.13
SRRM3A6NNA2 RAB34-223ENST00000636154 730 ntTSL 2 BASIC15.86■□□□□ 0.13
SRRM3A6NNA2 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SRRM3A6NNA2 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC15.86■□□□□ 0.13
SRRM3A6NNA2 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SRRM3A6NNA2 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
SRRM3A6NNA2 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
SRRM3A6NNA2 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC15.86■□□□□ 0.13
SRRM3A6NNA2 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC15.86■□□□□ 0.13
SRRM3A6NNA2 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
SRRM3A6NNA2 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
SRRM3A6NNA2 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
SRRM3A6NNA2 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
SRRM3A6NNA2 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC15.86■□□□□ 0.13
SRRM3A6NNA2 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SRRM3A6NNA2 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
SRRM3A6NNA2 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SRRM3A6NNA2 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
SRRM3A6NNA2 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
SRRM3A6NNA2 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SRRM3A6NNA2 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SRRM3A6NNA2 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SRRM3A6NNA2 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC15.85■□□□□ 0.13
SRRM3A6NNA2 AC079781.5-202ENST00000641784 3743 ntBASIC15.85■□□□□ 0.13
SRRM3A6NNA2 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SRRM3A6NNA2 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
SRRM3A6NNA2 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC15.85■□□□□ 0.13
SRRM3A6NNA2 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
SRRM3A6NNA2 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
SRRM3A6NNA2 USP35-204ENST00000530267 2419 ntTSL 2 BASIC15.85■□□□□ 0.13
SRRM3A6NNA2 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SRRM3A6NNA2 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC15.85■□□□□ 0.13
SRRM3A6NNA2 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
SRRM3A6NNA2 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC15.85■□□□□ 0.13
SRRM3A6NNA2 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
SRRM3A6NNA2 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SRRM3A6NNA2 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
SRRM3A6NNA2 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
SRRM3A6NNA2 RAC2-202ENST00000401529 569 ntTSL 4 BASIC15.85■□□□□ 0.13
SRRM3A6NNA2 HMGA1P7-201ENST00000406908 502 ntBASIC15.85■□□□□ 0.13
SRRM3A6NNA2 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC15.85■□□□□ 0.13
SRRM3A6NNA2 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC15.85■□□□□ 0.13
SRRM3A6NNA2 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC15.85■□□□□ 0.13
SRRM3A6NNA2 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC15.85■□□□□ 0.13
SRRM3A6NNA2 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC15.85■□□□□ 0.13
SRRM3A6NNA2 SNX29P1-201ENST00000548357 1007 ntBASIC15.85■□□□□ 0.13
SRRM3A6NNA2 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC15.85■□□□□ 0.13
SRRM3A6NNA2 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC15.85■□□□□ 0.13
SRRM3A6NNA2 CHCHD2P3-201ENST00000603038 451 ntBASIC15.85■□□□□ 0.13
SRRM3A6NNA2 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC15.85■□□□□ 0.13
SRRM3A6NNA2 AC004840.1-201ENST00000636359 365 ntBASIC15.85■□□□□ 0.13
SRRM3A6NNA2 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
SRRM3A6NNA2 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SRRM3A6NNA2 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC15.85■□□□□ 0.13
SRRM3A6NNA2 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SRRM3A6NNA2 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
SRRM3A6NNA2 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC15.85■□□□□ 0.13
SRRM3A6NNA2 AC134407.2-201ENST00000625089 1978 ntBASIC15.85■□□□□ 0.13
SRRM3A6NNA2 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC15.85■□□□□ 0.13
SRRM3A6NNA2 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
SRRM3A6NNA2 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SRRM3A6NNA2 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC15.85■□□□□ 0.13
SRRM3A6NNA2 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
SRRM3A6NNA2 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SRRM3A6NNA2 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
SRRM3A6NNA2 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SRRM3A6NNA2 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
SRRM3A6NNA2 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC15.85■□□□□ 0.13
SRRM3A6NNA2 AC015802.1-201ENST00000588104 1449 ntBASIC15.85■□□□□ 0.13
SRRM3A6NNA2 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
SRRM3A6NNA2 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC15.85■□□□□ 0.13
SRRM3A6NNA2 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SRRM3A6NNA2 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC15.84■□□□□ 0.13
SRRM3A6NNA2 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
SRRM3A6NNA2 C8orf31-201ENST00000395172 1875 ntTSL 2 BASIC15.84■□□□□ 0.13
SRRM3A6NNA2 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
SRRM3A6NNA2 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC15.84■□□□□ 0.13
SRRM3A6NNA2 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
SRRM3A6NNA2 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SRRM3A6NNA2 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC15.84■□□□□ 0.13
SRRM3A6NNA2 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SRRM3A6NNA2 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC15.84■□□□□ 0.13
SRRM3A6NNA2 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC15.84■□□□□ 0.13
SRRM3A6NNA2 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 57.3 ms