Protein–RNA interactions for Protein: Q9Y587

AP4S1, AP-4 complex subunit sigma-1, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1Q9Y587 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC14.47□□□□□ -0.09
AP4S1Q9Y587 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
AP4S1Q9Y587 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
AP4S1Q9Y587 ADCY3-202ENST00000405392 4397 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
AP4S1Q9Y587 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
AP4S1Q9Y587 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC14.47□□□□□ -0.09
AP4S1Q9Y587 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
AP4S1Q9Y587 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
AP4S1Q9Y587 PABPC1-201ENST00000318607 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
AP4S1Q9Y587 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC14.47□□□□□ -0.09
AP4S1Q9Y587 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
AP4S1Q9Y587 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
AP4S1Q9Y587 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
AP4S1Q9Y587 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC14.47□□□□□ -0.09
AP4S1Q9Y587 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC14.47□□□□□ -0.09
AP4S1Q9Y587 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC14.47□□□□□ -0.09
AP4S1Q9Y587 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC14.47□□□□□ -0.09
AP4S1Q9Y587 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
AP4S1Q9Y587 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC14.47□□□□□ -0.09
AP4S1Q9Y587 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC14.47□□□□□ -0.09
AP4S1Q9Y587 MED16-214ENST00000617672 554 ntTSL 5 BASIC14.47□□□□□ -0.09
AP4S1Q9Y587 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC14.47□□□□□ -0.09
AP4S1Q9Y587 SLIT3-206ENST00000519560 9706 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
AP4S1Q9Y587 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
AP4S1Q9Y587 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC14.47□□□□□ -0.09
AP4S1Q9Y587 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC14.47□□□□□ -0.09
AP4S1Q9Y587 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
AP4S1Q9Y587 MYOM3-202ENST00000374434 5804 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
AP4S1Q9Y587 CABP4-201ENST00000325656 2559 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
AP4S1Q9Y587 PCDHB16-201ENST00000609684 5001 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
AP4S1Q9Y587 DDX3X-201ENST00000399959 5399 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
AP4S1Q9Y587 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
AP4S1Q9Y587 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
AP4S1Q9Y587 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
AP4S1Q9Y587 TNS2-202ENST00000314276 4944 ntAPPRIS P4 TSL 1 (best) BASIC14.47□□□□□ -0.09
AP4S1Q9Y587 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
AP4S1Q9Y587 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
AP4S1Q9Y587 FAM219A-203ENST00000379080 3591 ntTSL 2 BASIC14.47□□□□□ -0.09
AP4S1Q9Y587 AC130686.1-201ENST00000622936 2466 ntBASIC14.47□□□□□ -0.09
AP4S1Q9Y587 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
AP4S1Q9Y587 DMPK-219ENST00000600757 3357 ntTSL 2 BASIC14.47□□□□□ -0.09
AP4S1Q9Y587 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC14.46□□□□□ -0.09
AP4S1Q9Y587 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC14.46□□□□□ -0.09
AP4S1Q9Y587 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
AP4S1Q9Y587 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC14.46□□□□□ -0.09
AP4S1Q9Y587 PHLDB2-204ENST00000431670 6127 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
AP4S1Q9Y587 TCAF2-202ENST00000411935 2906 ntTSL 5 BASIC14.46□□□□□ -0.09
AP4S1Q9Y587 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
AP4S1Q9Y587 DHX16-202ENST00000376442 3445 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
AP4S1Q9Y587 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC14.46□□□□□ -0.09
AP4S1Q9Y587 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC14.46□□□□□ -0.09
AP4S1Q9Y587 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
AP4S1Q9Y587 CBFA2T3-202ENST00000327483 4033 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
AP4S1Q9Y587 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
AP4S1Q9Y587 VTI1B-204ENST00000554659 5351 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
AP4S1Q9Y587 RNF44-201ENST00000274811 4155 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
AP4S1Q9Y587 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
AP4S1Q9Y587 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
AP4S1Q9Y587 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
AP4S1Q9Y587 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
AP4S1Q9Y587 AZGP1P1-201ENST00000411909 902 ntBASIC14.46□□□□□ -0.09
AP4S1Q9Y587 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
AP4S1Q9Y587 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
AP4S1Q9Y587 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
AP4S1Q9Y587 SLC23A1-201ENST00000348729 2299 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
AP4S1Q9Y587 TNIK-204ENST00000436636 6970 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
AP4S1Q9Y587 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC14.46□□□□□ -0.09
AP4S1Q9Y587 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
AP4S1Q9Y587 DEPTOR-201ENST00000286234 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
AP4S1Q9Y587 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.1
AP4S1Q9Y587 DPYSL2-204ENST00000521913 4805 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
AP4S1Q9Y587 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC14.46□□□□□ -0.1
AP4S1Q9Y587 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC14.46□□□□□ -0.1
AP4S1Q9Y587 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC14.46□□□□□ -0.1
AP4S1Q9Y587 ZBTB20-215ENST00000481632 2800 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
AP4S1Q9Y587 PCM1-202ENST00000327578 8287 ntTSL 5 BASIC14.46□□□□□ -0.1
AP4S1Q9Y587 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
AP4S1Q9Y587 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC14.46□□□□□ -0.1
AP4S1Q9Y587 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
AP4S1Q9Y587 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
AP4S1Q9Y587 FXR1-214ENST00000480918 1996 ntTSL 2 BASIC14.45□□□□□ -0.1
AP4S1Q9Y587 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
AP4S1Q9Y587 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC14.45□□□□□ -0.1
AP4S1Q9Y587 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC14.45□□□□□ -0.1
AP4S1Q9Y587 CFAP74-209ENST00000493964 5247 ntAPPRIS P5 TSL 5 BASIC14.45□□□□□ -0.1
AP4S1Q9Y587 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC14.45□□□□□ -0.1
AP4S1Q9Y587 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
AP4S1Q9Y587 MAPT-IT1-201ENST00000624111 3016 ntBASIC14.45□□□□□ -0.1
AP4S1Q9Y587 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC14.45□□□□□ -0.1
AP4S1Q9Y587 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC14.45□□□□□ -0.1
AP4S1Q9Y587 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
AP4S1Q9Y587 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
AP4S1Q9Y587 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
AP4S1Q9Y587 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC14.45□□□□□ -0.1
AP4S1Q9Y587 HNRNPH1-204ENST00000442819 2248 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
AP4S1Q9Y587 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
AP4S1Q9Y587 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
AP4S1Q9Y587 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
AP4S1Q9Y587 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
AP4S1Q9Y587 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 80 ms