Protein–RNA interactions for Protein: Q9UHD9

UBQLN2, Ubiquilin-2, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN2Q9UHD9 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC12.98□□□□□ -0.33
UBQLN2Q9UHD9 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC12.98□□□□□ -0.33
UBQLN2Q9UHD9 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
UBQLN2Q9UHD9 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
UBQLN2Q9UHD9 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
UBQLN2Q9UHD9 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
UBQLN2Q9UHD9 DLX1-203ENST00000361725 2640 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
UBQLN2Q9UHD9 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC12.98□□□□□ -0.33
UBQLN2Q9UHD9 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
UBQLN2Q9UHD9 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
UBQLN2Q9UHD9 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
UBQLN2Q9UHD9 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC12.98□□□□□ -0.33
UBQLN2Q9UHD9 POLD1-214ENST00000613923 3542 ntTSL 5 BASIC12.98□□□□□ -0.33
UBQLN2Q9UHD9 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
UBQLN2Q9UHD9 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC12.98□□□□□ -0.33
UBQLN2Q9UHD9 CD276-202ENST00000318443 3469 ntAPPRIS P2 TSL 2 BASIC12.98□□□□□ -0.33
UBQLN2Q9UHD9 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
UBQLN2Q9UHD9 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
UBQLN2Q9UHD9 SF1-205ENST00000377394 2854 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
UBQLN2Q9UHD9 SPHK2-206ENST00000598088 2866 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
UBQLN2Q9UHD9 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
UBQLN2Q9UHD9 AC114271.1-201ENST00000612689 2813 ntBASIC12.98□□□□□ -0.33
UBQLN2Q9UHD9 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
UBQLN2Q9UHD9 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC12.98□□□□□ -0.33
UBQLN2Q9UHD9 AL662844.1-201ENST00000546340 181 ntBASIC12.98□□□□□ -0.33
UBQLN2Q9UHD9 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC12.98□□□□□ -0.33
UBQLN2Q9UHD9 AC025062.2-201ENST00000605477 670 ntBASIC12.98□□□□□ -0.33
UBQLN2Q9UHD9 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC12.98□□□□□ -0.33
UBQLN2Q9UHD9 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
UBQLN2Q9UHD9 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
UBQLN2Q9UHD9 MYO1C-218ENST00000575158 4804 ntAPPRIS P3 TSL 5 BASIC12.98□□□□□ -0.33
UBQLN2Q9UHD9 CD48-201ENST00000368045 1793 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
UBQLN2Q9UHD9 C15orf39-207ENST00000567617 4249 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
UBQLN2Q9UHD9 ASB3-201ENST00000263634 2214 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
UBQLN2Q9UHD9 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
UBQLN2Q9UHD9 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC12.98□□□□□ -0.33
UBQLN2Q9UHD9 SLC9B2-202ENST00000394785 3126 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
UBQLN2Q9UHD9 AC012349.1-201ENST00000518662 2643 ntTSL 2 BASIC12.98□□□□□ -0.33
UBQLN2Q9UHD9 KIAA1683-201ENST00000392413 4402 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
UBQLN2Q9UHD9 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC12.98□□□□□ -0.33
UBQLN2Q9UHD9 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
UBQLN2Q9UHD9 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
UBQLN2Q9UHD9 CCHCR1-203ENST00000396268 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
UBQLN2Q9UHD9 COL6A3-206ENST00000409809 8916 ntTSL 5 BASIC12.98□□□□□ -0.33
UBQLN2Q9UHD9 AC114689.3-201ENST00000583687 2991 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
UBQLN2Q9UHD9 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
UBQLN2Q9UHD9 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
UBQLN2Q9UHD9 PNPLA6-201ENST00000221249 4617 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
UBQLN2Q9UHD9 ACE3P-201ENST00000423435 1973 ntBASIC12.98□□□□□ -0.33
UBQLN2Q9UHD9 AP1G2-201ENST00000308724 3298 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
UBQLN2Q9UHD9 RAP2B-201ENST00000323534 8351 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
UBQLN2Q9UHD9 CDH3-201ENST00000264012 4929 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
UBQLN2Q9UHD9 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC12.98□□□□□ -0.33
UBQLN2Q9UHD9 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
UBQLN2Q9UHD9 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC12.97□□□□□ -0.33
UBQLN2Q9UHD9 SNX19-211ENST00000533214 3096 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
UBQLN2Q9UHD9 WASH6P-202ENST00000359512 1437 ntBASIC12.97□□□□□ -0.33
UBQLN2Q9UHD9 SCNN1A-215ENST00000540037 3040 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
UBQLN2Q9UHD9 OR52A1-202ENST00000380367 9783 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
UBQLN2Q9UHD9 SDC2-201ENST00000302190 3759 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
UBQLN2Q9UHD9 ITGB2-201ENST00000302347 2955 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
UBQLN2Q9UHD9 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
UBQLN2Q9UHD9 KSR1-204ENST00000398988 7237 ntAPPRIS P2 TSL 5 BASIC12.97□□□□□ -0.33
UBQLN2Q9UHD9 DDX43-201ENST00000370336 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
UBQLN2Q9UHD9 FES-203ENST00000394302 2133 ntTSL 5 BASIC12.97□□□□□ -0.33
UBQLN2Q9UHD9 DDX31-202ENST00000372153 3285 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
UBQLN2Q9UHD9 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
UBQLN2Q9UHD9 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
UBQLN2Q9UHD9 EPHA5-204ENST00000511294 5176 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
UBQLN2Q9UHD9 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
UBQLN2Q9UHD9 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
UBQLN2Q9UHD9 ERAP1-201ENST00000296754 5495 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
UBQLN2Q9UHD9 SLC4A5-201ENST00000346834 6233 ntAPPRIS P4 TSL 5 BASIC12.97□□□□□ -0.33
UBQLN2Q9UHD9 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
UBQLN2Q9UHD9 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
UBQLN2Q9UHD9 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
UBQLN2Q9UHD9 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
UBQLN2Q9UHD9 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
UBQLN2Q9UHD9 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
UBQLN2Q9UHD9 AL031284.1-201ENST00000419297 478 ntBASIC12.97□□□□□ -0.33
UBQLN2Q9UHD9 HNRNPDP1-201ENST00000439535 754 ntBASIC12.97□□□□□ -0.33
UBQLN2Q9UHD9 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
UBQLN2Q9UHD9 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
UBQLN2Q9UHD9 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC12.97□□□□□ -0.33
UBQLN2Q9UHD9 PENK-208ENST00000523051 772 ntTSL 5 BASIC12.97□□□□□ -0.33
UBQLN2Q9UHD9 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC12.97□□□□□ -0.33
UBQLN2Q9UHD9 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC12.97□□□□□ -0.33
UBQLN2Q9UHD9 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC12.97□□□□□ -0.33
UBQLN2Q9UHD9 AP001005.1-201ENST00000571755 1248 ntBASIC12.97□□□□□ -0.33
UBQLN2Q9UHD9 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC12.97□□□□□ -0.33
UBQLN2Q9UHD9 AL049840.3-201ENST00000602669 611 ntBASIC12.97□□□□□ -0.33
UBQLN2Q9UHD9 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC12.97□□□□□ -0.33
UBQLN2Q9UHD9 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC12.97□□□□□ -0.33
UBQLN2Q9UHD9 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC12.97□□□□□ -0.33
UBQLN2Q9UHD9 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
UBQLN2Q9UHD9 ZYG11A-201ENST00000371528 4469 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
UBQLN2Q9UHD9 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
UBQLN2Q9UHD9 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC12.97□□□□□ -0.33
UBQLN2Q9UHD9 NDRG4-221ENST00000563799 3014 ntAPPRIS ALT1 TSL 2 BASIC12.97□□□□□ -0.33
UBQLN2Q9UHD9 KCNH6-204ENST00000581784 3017 ntTSL 2 BASIC12.97□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms