Protein–RNA interactions for Protein: Q9UBE8

NLK, Serine/threonine-protein kinase NLK, humanhuman

Predictions only

Length 527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NLKQ9UBE8 JPH3-201ENST00000284262 3985 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
NLKQ9UBE8 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
NLKQ9UBE8 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
NLKQ9UBE8 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
NLKQ9UBE8 HNRNPH1-203ENST00000393432 2279 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
NLKQ9UBE8 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
NLKQ9UBE8 AL356585.2-201ENST00000625078 2396 ntBASIC13.65□□□□□ -0.22
NLKQ9UBE8 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
NLKQ9UBE8 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
NLKQ9UBE8 BCAN-201ENST00000329117 3466 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
NLKQ9UBE8 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC13.65□□□□□ -0.23
NLKQ9UBE8 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
NLKQ9UBE8 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC13.64□□□□□ -0.23
NLKQ9UBE8 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
NLKQ9UBE8 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC13.64□□□□□ -0.23
NLKQ9UBE8 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC13.64□□□□□ -0.23
NLKQ9UBE8 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC13.64□□□□□ -0.23
NLKQ9UBE8 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
NLKQ9UBE8 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC13.64□□□□□ -0.23
NLKQ9UBE8 MINDY1-207ENST00000622754 2637 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
NLKQ9UBE8 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
NLKQ9UBE8 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC13.64□□□□□ -0.23
NLKQ9UBE8 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
NLKQ9UBE8 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
NLKQ9UBE8 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC13.64□□□□□ -0.23
NLKQ9UBE8 AC027612.1-201ENST00000445234 2395 ntBASIC13.64□□□□□ -0.23
NLKQ9UBE8 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC13.64□□□□□ -0.23
NLKQ9UBE8 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
NLKQ9UBE8 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC13.64□□□□□ -0.23
NLKQ9UBE8 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
NLKQ9UBE8 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC13.64□□□□□ -0.23
NLKQ9UBE8 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
NLKQ9UBE8 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC13.64□□□□□ -0.23
NLKQ9UBE8 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
NLKQ9UBE8 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
NLKQ9UBE8 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC13.64□□□□□ -0.23
NLKQ9UBE8 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC13.64□□□□□ -0.23
NLKQ9UBE8 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
NLKQ9UBE8 FAM220BP-201ENST00000377689 816 ntBASIC13.64□□□□□ -0.23
NLKQ9UBE8 NME2-201ENST00000393183 568 ntTSL 2 BASIC13.64□□□□□ -0.23
NLKQ9UBE8 MIR1233-2-201ENST00000408138 82 ntBASIC13.64□□□□□ -0.23
NLKQ9UBE8 MIR1233-1-201ENST00000408722 82 ntBASIC13.64□□□□□ -0.23
NLKQ9UBE8 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
NLKQ9UBE8 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC13.64□□□□□ -0.23
NLKQ9UBE8 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC13.64□□□□□ -0.23
NLKQ9UBE8 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
NLKQ9UBE8 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC13.64□□□□□ -0.23
NLKQ9UBE8 SSH2-211ENST00000590153 570 ntTSL 4 BASIC13.64□□□□□ -0.23
NLKQ9UBE8 AC084121.4-201ENST00000641598 221 ntBASIC13.64□□□□□ -0.23
NLKQ9UBE8 AF228730.8-201ENST00000642140 221 ntBASIC13.64□□□□□ -0.23
NLKQ9UBE8 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
NLKQ9UBE8 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
NLKQ9UBE8 TCAF2-202ENST00000411935 2906 ntTSL 5 BASIC13.64□□□□□ -0.23
NLKQ9UBE8 TMEM231-207ENST00000568377 2920 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
NLKQ9UBE8 KCTD7-201ENST00000275532 4795 ntTSL 4 BASIC13.64□□□□□ -0.23
NLKQ9UBE8 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
NLKQ9UBE8 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
NLKQ9UBE8 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC13.64□□□□□ -0.23
NLKQ9UBE8 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
NLKQ9UBE8 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
NLKQ9UBE8 CABLES2-201ENST00000279101 3785 ntAPPRIS P2 TSL 5 BASIC13.64□□□□□ -0.23
NLKQ9UBE8 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
NLKQ9UBE8 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
NLKQ9UBE8 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
NLKQ9UBE8 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
NLKQ9UBE8 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
NLKQ9UBE8 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
NLKQ9UBE8 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
NLKQ9UBE8 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC13.64□□□□□ -0.23
NLKQ9UBE8 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC13.64□□□□□ -0.23
NLKQ9UBE8 FAM156A-221ENST00000622447 3757 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
NLKQ9UBE8 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
NLKQ9UBE8 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
NLKQ9UBE8 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC13.63□□□□□ -0.23
NLKQ9UBE8 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
NLKQ9UBE8 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
NLKQ9UBE8 EPHB3-201ENST00000330394 4236 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
NLKQ9UBE8 ZNF202-206ENST00000529691 3384 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
NLKQ9UBE8 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
NLKQ9UBE8 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC13.63□□□□□ -0.23
NLKQ9UBE8 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
NLKQ9UBE8 SSTR1-201ENST00000267377 4295 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
NLKQ9UBE8 TCAF1P1-201ENST00000414990 2232 ntBASIC13.63□□□□□ -0.23
NLKQ9UBE8 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC13.63□□□□□ -0.23
NLKQ9UBE8 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC13.63□□□□□ -0.23
NLKQ9UBE8 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
NLKQ9UBE8 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
NLKQ9UBE8 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC13.63□□□□□ -0.23
NLKQ9UBE8 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
NLKQ9UBE8 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
NLKQ9UBE8 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
NLKQ9UBE8 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
NLKQ9UBE8 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
NLKQ9UBE8 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
NLKQ9UBE8 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
NLKQ9UBE8 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
NLKQ9UBE8 AL627223.1-201ENST00000416693 442 ntBASIC13.63□□□□□ -0.23
NLKQ9UBE8 AC254562.1-201ENST00000417586 456 ntBASIC13.63□□□□□ -0.23
NLKQ9UBE8 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
NLKQ9UBE8 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms