Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
LIN7CQ9NUP9 KRT8P12-202ENST00000472924 1397 ntBASIC12.75□□□□□ -0.37
LIN7CQ9NUP9 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
LIN7CQ9NUP9 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
LIN7CQ9NUP9 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
LIN7CQ9NUP9 AC027369.6-201ENST00000525520 931 ntBASIC12.75□□□□□ -0.37
LIN7CQ9NUP9 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
LIN7CQ9NUP9 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC12.75□□□□□ -0.37
LIN7CQ9NUP9 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
LIN7CQ9NUP9 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC12.75□□□□□ -0.37
LIN7CQ9NUP9 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
LIN7CQ9NUP9 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
LIN7CQ9NUP9 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC12.75□□□□□ -0.37
LIN7CQ9NUP9 AC027796.2-201ENST00000575326 344 ntBASIC12.75□□□□□ -0.37
LIN7CQ9NUP9 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
LIN7CQ9NUP9 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
LIN7CQ9NUP9 SPDYE12P-201ENST00000618416 771 ntBASIC12.75□□□□□ -0.37
LIN7CQ9NUP9 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC12.75□□□□□ -0.37
LIN7CQ9NUP9 ADAMTS7P1-201ENST00000613213 4793 ntBASIC12.75□□□□□ -0.37
LIN7CQ9NUP9 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
LIN7CQ9NUP9 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
LIN7CQ9NUP9 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
LIN7CQ9NUP9 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
LIN7CQ9NUP9 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
LIN7CQ9NUP9 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC12.75□□□□□ -0.37
LIN7CQ9NUP9 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC12.74□□□□□ -0.37
LIN7CQ9NUP9 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
LIN7CQ9NUP9 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC12.74□□□□□ -0.37
LIN7CQ9NUP9 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
LIN7CQ9NUP9 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC12.74□□□□□ -0.37
LIN7CQ9NUP9 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
LIN7CQ9NUP9 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
LIN7CQ9NUP9 INTS4P1-203ENST00000641008 3683 ntBASIC12.74□□□□□ -0.37
LIN7CQ9NUP9 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
LIN7CQ9NUP9 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC12.74□□□□□ -0.37
LIN7CQ9NUP9 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
LIN7CQ9NUP9 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
LIN7CQ9NUP9 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC12.74□□□□□ -0.37
LIN7CQ9NUP9 IMPDH1P4-201ENST00000445028 1534 ntBASIC12.74□□□□□ -0.37
LIN7CQ9NUP9 MPI-203ENST00000535694 1523 ntTSL 2 BASIC12.74□□□□□ -0.37
LIN7CQ9NUP9 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
LIN7CQ9NUP9 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC12.74□□□□□ -0.37
LIN7CQ9NUP9 AC005324.3-201ENST00000455584 5514 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
LIN7CQ9NUP9 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC12.74□□□□□ -0.37
LIN7CQ9NUP9 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC12.74□□□□□ -0.37
LIN7CQ9NUP9 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
LIN7CQ9NUP9 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
LIN7CQ9NUP9 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC12.74□□□□□ -0.37
LIN7CQ9NUP9 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
LIN7CQ9NUP9 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
LIN7CQ9NUP9 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
LIN7CQ9NUP9 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
LIN7CQ9NUP9 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
LIN7CQ9NUP9 AC055876.3-201ENST00000431496 288 ntBASIC12.74□□□□□ -0.37
LIN7CQ9NUP9 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC12.74□□□□□ -0.37
LIN7CQ9NUP9 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
LIN7CQ9NUP9 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC12.74□□□□□ -0.37
LIN7CQ9NUP9 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC12.74□□□□□ -0.37
LIN7CQ9NUP9 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC12.74□□□□□ -0.37
LIN7CQ9NUP9 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC12.74□□□□□ -0.37
LIN7CQ9NUP9 DUX4L27-201ENST00000554796 1261 ntBASIC12.74□□□□□ -0.37
LIN7CQ9NUP9 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
LIN7CQ9NUP9 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC12.74□□□□□ -0.37
LIN7CQ9NUP9 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC12.74□□□□□ -0.37
LIN7CQ9NUP9 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC12.74□□□□□ -0.37
LIN7CQ9NUP9 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC12.74□□□□□ -0.37
LIN7CQ9NUP9 AC138649.4-201ENST00000612222 287 ntBASIC12.74□□□□□ -0.37
LIN7CQ9NUP9 AL138828.2-201ENST00000615812 383 ntBASIC12.74□□□□□ -0.37
LIN7CQ9NUP9 RAB34-223ENST00000636154 730 ntTSL 2 BASIC12.74□□□□□ -0.37
LIN7CQ9NUP9 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC12.74□□□□□ -0.37
LIN7CQ9NUP9 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
LIN7CQ9NUP9 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
LIN7CQ9NUP9 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
LIN7CQ9NUP9 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
LIN7CQ9NUP9 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
LIN7CQ9NUP9 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC12.74□□□□□ -0.37
LIN7CQ9NUP9 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
LIN7CQ9NUP9 WNK1-201ENST00000315939 10452 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
LIN7CQ9NUP9 AFF3-201ENST00000317233 8135 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
LIN7CQ9NUP9 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC12.74□□□□□ -0.37
LIN7CQ9NUP9 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
LIN7CQ9NUP9 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
LIN7CQ9NUP9 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC12.74□□□□□ -0.37
LIN7CQ9NUP9 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
LIN7CQ9NUP9 GRSF1-201ENST00000254799 6666 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
LIN7CQ9NUP9 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
LIN7CQ9NUP9 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
LIN7CQ9NUP9 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
LIN7CQ9NUP9 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC12.73□□□□□ -0.37
LIN7CQ9NUP9 C1R-202ENST00000536053 2347 ntTSL 2 BASIC12.73□□□□□ -0.37
LIN7CQ9NUP9 AC140479.7-201ENST00000636301 2332 ntBASIC12.73□□□□□ -0.37
LIN7CQ9NUP9 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC12.73□□□□□ -0.37
LIN7CQ9NUP9 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC12.73□□□□□ -0.37
LIN7CQ9NUP9 FAM30A-205ENST00000630242 9612 ntTSL 2 BASIC12.73□□□□□ -0.37
LIN7CQ9NUP9 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC12.73□□□□□ -0.37
LIN7CQ9NUP9 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
LIN7CQ9NUP9 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
LIN7CQ9NUP9 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC12.73□□□□□ -0.37
LIN7CQ9NUP9 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
LIN7CQ9NUP9 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 53.8 ms