Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 NAP1L1-201ENST00000261182 4441 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
CDC42SE1Q9NRR8 PACRG-AS1-201ENST00000626335 2192 ntTSL 2 BASIC7.63□□□□□ -1.19
CDC42SE1Q9NRR8 CDH16-204ENST00000565796 2694 ntTSL 2 BASIC7.63□□□□□ -1.19
CDC42SE1Q9NRR8 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
CDC42SE1Q9NRR8 OSBPL1A-201ENST00000319481 4195 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
CDC42SE1Q9NRR8 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC7.62□□□□□ -1.19
CDC42SE1Q9NRR8 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC7.62□□□□□ -1.19
CDC42SE1Q9NRR8 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC7.62□□□□□ -1.19
CDC42SE1Q9NRR8 DZIP1-201ENST00000347108 7068 ntAPPRIS P4 TSL 5 BASIC7.62□□□□□ -1.19
CDC42SE1Q9NRR8 TXNRD1-214ENST00000526691 3974 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
CDC42SE1Q9NRR8 STK24-201ENST00000376547 2492 ntAPPRIS P3 TSL 1 (best) BASIC7.62□□□□□ -1.19
CDC42SE1Q9NRR8 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC7.62□□□□□ -1.19
CDC42SE1Q9NRR8 TBC1D14-201ENST00000409757 4925 ntAPPRIS P3 TSL 1 (best) BASIC7.62□□□□□ -1.19
CDC42SE1Q9NRR8 CASZ1-201ENST00000344008 4405 ntTSL 2 BASIC7.62□□□□□ -1.19
CDC42SE1Q9NRR8 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC7.62□□□□□ -1.19
CDC42SE1Q9NRR8 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC7.62□□□□□ -1.19
CDC42SE1Q9NRR8 LBHD1-204ENST00000431002 2915 ntAPPRIS ALT2 TSL 2 BASIC7.62□□□□□ -1.19
CDC42SE1Q9NRR8 AMPD2-201ENST00000256578 3899 ntAPPRIS P2 TSL 5 BASIC7.62□□□□□ -1.19
CDC42SE1Q9NRR8 RNF170-206ENST00000527424 3880 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
CDC42SE1Q9NRR8 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC7.62□□□□□ -1.19
CDC42SE1Q9NRR8 KCNAB2-201ENST00000164247 4273 ntAPPRIS P4 TSL 2 BASIC7.62□□□□□ -1.19
CDC42SE1Q9NRR8 IKZF1-201ENST00000331340 6189 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
CDC42SE1Q9NRR8 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
CDC42SE1Q9NRR8 PRPF40B-209ENST00000548825 3307 ntAPPRIS P2 TSL 5 BASIC7.62□□□□□ -1.19
CDC42SE1Q9NRR8 MTHFR-204ENST00000376590 7094 ntAPPRIS P3 TSL 1 (best) BASIC7.62□□□□□ -1.19
CDC42SE1Q9NRR8 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
CDC42SE1Q9NRR8 ASCC2-201ENST00000307790 2793 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
CDC42SE1Q9NRR8 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
CDC42SE1Q9NRR8 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC7.62□□□□□ -1.19
CDC42SE1Q9NRR8 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC7.62□□□□□ -1.19
CDC42SE1Q9NRR8 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
CDC42SE1Q9NRR8 TP53-222ENST00000617185 2724 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
CDC42SE1Q9NRR8 MYO5B-201ENST00000285039 9505 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
CDC42SE1Q9NRR8 TNC-203ENST00000423613 6281 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
CDC42SE1Q9NRR8 PPP1R26P2-201ENST00000611403 3595 ntBASIC7.62□□□□□ -1.19
CDC42SE1Q9NRR8 CRHR2-201ENST00000341843 3131 ntTSL 5 BASIC7.62□□□□□ -1.19
CDC42SE1Q9NRR8 SH3KBP1-202ENST00000379698 2678 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
CDC42SE1Q9NRR8 RAB6A-202ENST00000336083 3085 ntAPPRIS ALT1 TSL 1 (best) BASIC7.62□□□□□ -1.19
CDC42SE1Q9NRR8 ARHGAP6-201ENST00000303025 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC7.62□□□□□ -1.19
CDC42SE1Q9NRR8 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC7.62□□□□□ -1.19
CDC42SE1Q9NRR8 XPC-201ENST00000285021 3832 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
CDC42SE1Q9NRR8 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
CDC42SE1Q9NRR8 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC7.62□□□□□ -1.19
CDC42SE1Q9NRR8 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
CDC42SE1Q9NRR8 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC7.62□□□□□ -1.19
CDC42SE1Q9NRR8 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC7.62□□□□□ -1.19
CDC42SE1Q9NRR8 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC7.62□□□□□ -1.19
CDC42SE1Q9NRR8 AC008687.5-201ENST00000593746 558 ntBASIC7.62□□□□□ -1.19
CDC42SE1Q9NRR8 AC010997.5-201ENST00000609182 354 ntBASIC7.62□□□□□ -1.19
CDC42SE1Q9NRR8 AC010654.1-201ENST00000615722 808 ntBASIC7.62□□□□□ -1.19
CDC42SE1Q9NRR8 AC105233.4-201ENST00000642045 216 ntBASIC7.62□□□□□ -1.19
CDC42SE1Q9NRR8 ZNF106-205ENST00000565611 5081 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
CDC42SE1Q9NRR8 AC020763.3-201ENST00000625095 2904 ntBASIC7.62□□□□□ -1.19
CDC42SE1Q9NRR8 ZNF423-201ENST00000262383 4578 ntAPPRIS P3 TSL 1 (best) BASIC7.62□□□□□ -1.19
CDC42SE1Q9NRR8 GCN1-201ENST00000300648 8675 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
CDC42SE1Q9NRR8 FAM213A-203ENST00000372187 1647 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
CDC42SE1Q9NRR8 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
CDC42SE1Q9NRR8 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC7.62□□□□□ -1.19
CDC42SE1Q9NRR8 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC7.62□□□□□ -1.19
CDC42SE1Q9NRR8 SLC33A1-201ENST00000359479 2404 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
CDC42SE1Q9NRR8 CAPN8-201ENST00000366872 2427 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
CDC42SE1Q9NRR8 PTPRN2-202ENST00000389416 4692 ntAPPRIS ALT2 TSL 1 (best) BASIC7.62□□□□□ -1.19
CDC42SE1Q9NRR8 AC245100.6-201ENST00000427169 1918 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
CDC42SE1Q9NRR8 ANKRD17-202ENST00000358602 10784 ntAPPRIS P4 TSL 5 BASIC7.62□□□□□ -1.19
CDC42SE1Q9NRR8 SEPT10-201ENST00000356688 3091 ntTSL 2 BASIC7.62□□□□□ -1.19
CDC42SE1Q9NRR8 ARHGAP12-203ENST00000375245 4958 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
CDC42SE1Q9NRR8 SHOX-203ENST00000381578 3757 ntAPPRIS P1 TSL 5 BASIC7.62□□□□□ -1.19
CDC42SE1Q9NRR8 SEC24B-202ENST00000399100 3780 ntAPPRIS P3 TSL 1 (best) BASIC7.62□□□□□ -1.19
CDC42SE1Q9NRR8 ARF3-201ENST00000256682 4105 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
CDC42SE1Q9NRR8 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
CDC42SE1Q9NRR8 GLIPR2-202ENST00000377960 1890 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
CDC42SE1Q9NRR8 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC7.62□□□□□ -1.19
CDC42SE1Q9NRR8 MARCH8-204ENST00000453424 5638 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
CDC42SE1Q9NRR8 PLEKHG4-204ENST00000427155 4455 ntAPPRIS P3 TSL 5 BASIC7.62□□□□□ -1.19
CDC42SE1Q9NRR8 THSD1-201ENST00000258613 2962 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
CDC42SE1Q9NRR8 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC7.62□□□□□ -1.19
CDC42SE1Q9NRR8 SLC7A3-202ENST00000374299 2236 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
CDC42SE1Q9NRR8 CYP24A1-203ENST00000395955 2227 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
CDC42SE1Q9NRR8 AL845472.1-202ENST00000624675 4080 ntBASIC7.62□□□□□ -1.19
CDC42SE1Q9NRR8 KCND3-203ENST00000369697 7396 ntAPPRIS ALT1 TSL 1 (best) BASIC7.62□□□□□ -1.19
CDC42SE1Q9NRR8 MCM3AP-201ENST00000291688 6193 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
CDC42SE1Q9NRR8 ACACB-201ENST00000338432 9360 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
CDC42SE1Q9NRR8 FHDC1-201ENST00000260008 6480 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
CDC42SE1Q9NRR8 PDE2A-203ENST00000418754 2855 ntTSL 2 BASIC7.61□□□□□ -1.19
CDC42SE1Q9NRR8 LIG1-221ENST00000613670 3949 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
CDC42SE1Q9NRR8 DPP9-201ENST00000262960 4295 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
CDC42SE1Q9NRR8 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC7.61□□□□□ -1.19
CDC42SE1Q9NRR8 TMEM9B-202ENST00000525069 1433 ntTSL 2 BASIC7.61□□□□□ -1.19
CDC42SE1Q9NRR8 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC7.61□□□□□ -1.19
CDC42SE1Q9NRR8 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
CDC42SE1Q9NRR8 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC7.61□□□□□ -1.19
CDC42SE1Q9NRR8 A1CF-204ENST00000373997 2116 ntAPPRIS ALT1 TSL 1 (best) BASIC7.61□□□□□ -1.19
CDC42SE1Q9NRR8 ERCC1-202ENST00000300853 3828 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
CDC42SE1Q9NRR8 PITRM1-201ENST00000224949 3450 ntAPPRIS ALT2 TSL 1 (best) BASIC7.61□□□□□ -1.19
CDC42SE1Q9NRR8 CAST-223ENST00000508608 2425 ntAPPRIS ALT2 TSL 2 BASIC7.61□□□□□ -1.19
CDC42SE1Q9NRR8 ECD-205ENST00000454759 2084 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
CDC42SE1Q9NRR8 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
CDC42SE1Q9NRR8 AL512652.2-201ENST00000625156 1716 ntBASIC7.61□□□□□ -1.19
CDC42SE1Q9NRR8 SH2D3C-202ENST00000373276 3051 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
CDC42SE1Q9NRR8 AKAP1-208ENST00000572557 3098 ntAPPRIS P1 TSL 5 BASIC7.61□□□□□ -1.19
Retrieved 100 of 98,524 protein–RNA pairs in 76.2 ms