Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
UPF2Q9HAU5 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
UPF2Q9HAU5 ZNF259P1-201ENST00000407656 1365 ntBASIC18.8■□□□□ 0.6
UPF2Q9HAU5 ITGA6-202ENST00000409080 5306 ntTSL 2 BASIC18.8■□□□□ 0.6
UPF2Q9HAU5 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC18.8■□□□□ 0.6
UPF2Q9HAU5 TNS2-202ENST00000314276 4944 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
UPF2Q9HAU5 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
UPF2Q9HAU5 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
UPF2Q9HAU5 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
UPF2Q9HAU5 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
UPF2Q9HAU5 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
UPF2Q9HAU5 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
UPF2Q9HAU5 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC18.79■□□□□ 0.6
UPF2Q9HAU5 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
UPF2Q9HAU5 SIPA1L3-201ENST00000222345 7987 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
UPF2Q9HAU5 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
UPF2Q9HAU5 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC18.79■□□□□ 0.6
UPF2Q9HAU5 CACNA1I-202ENST00000402142 10004 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
UPF2Q9HAU5 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
UPF2Q9HAU5 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC18.79■□□□□ 0.6
UPF2Q9HAU5 TFAM-204ENST00000487519 5414 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
UPF2Q9HAU5 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
UPF2Q9HAU5 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
UPF2Q9HAU5 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
UPF2Q9HAU5 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC18.79■□□□□ 0.6
UPF2Q9HAU5 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
UPF2Q9HAU5 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
UPF2Q9HAU5 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
UPF2Q9HAU5 AL450487.1-201ENST00000426799 995 ntBASIC18.79■□□□□ 0.6
UPF2Q9HAU5 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC18.79■□□□□ 0.6
UPF2Q9HAU5 AL591424.1-201ENST00000442569 1213 ntBASIC18.79■□□□□ 0.6
UPF2Q9HAU5 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC18.79■□□□□ 0.6
UPF2Q9HAU5 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC18.79■□□□□ 0.6
UPF2Q9HAU5 AC015910.1-201ENST00000579400 975 ntBASIC18.79■□□□□ 0.6
UPF2Q9HAU5 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC18.79■□□□□ 0.6
UPF2Q9HAU5 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC18.79■□□□□ 0.6
UPF2Q9HAU5 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC18.79■□□□□ 0.6
UPF2Q9HAU5 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC18.79■□□□□ 0.6
UPF2Q9HAU5 AC092902.6-201ENST00000641783 218 ntBASIC18.79■□□□□ 0.6
UPF2Q9HAU5 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
UPF2Q9HAU5 C1R-201ENST00000535233 2211 ntTSL 2 BASIC18.79■□□□□ 0.6
UPF2Q9HAU5 WNK1-201ENST00000315939 10452 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
UPF2Q9HAU5 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
UPF2Q9HAU5 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
UPF2Q9HAU5 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC18.79■□□□□ 0.6
UPF2Q9HAU5 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC18.79■□□□□ 0.6
UPF2Q9HAU5 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC18.79■□□□□ 0.6
UPF2Q9HAU5 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
UPF2Q9HAU5 MFF-204ENST00000353339 2186 ntTSL 5 BASIC18.79■□□□□ 0.6
UPF2Q9HAU5 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
UPF2Q9HAU5 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
UPF2Q9HAU5 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
UPF2Q9HAU5 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC18.79■□□□□ 0.6
UPF2Q9HAU5 DDX31-204ENST00000372159 4577 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
UPF2Q9HAU5 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
UPF2Q9HAU5 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC18.79■□□□□ 0.6
UPF2Q9HAU5 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC18.79■□□□□ 0.6
UPF2Q9HAU5 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
UPF2Q9HAU5 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC18.79■□□□□ 0.6
UPF2Q9HAU5 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
UPF2Q9HAU5 OS9-207ENST00000439210 1946 ntTSL 2 BASIC18.78■□□□□ 0.6
UPF2Q9HAU5 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
UPF2Q9HAU5 ZBTB45P1-201ENST00000452761 1456 ntBASIC18.78■□□□□ 0.6
UPF2Q9HAU5 AC138969.3-201ENST00000546612 1459 ntBASIC18.78■□□□□ 0.6
UPF2Q9HAU5 AC138932.2-201ENST00000548268 1459 ntBASIC18.78■□□□□ 0.6
UPF2Q9HAU5 AC126755.4-201ENST00000549796 1459 ntBASIC18.78■□□□□ 0.6
UPF2Q9HAU5 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
UPF2Q9HAU5 FBXO21-202ENST00000427718 4138 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
UPF2Q9HAU5 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
UPF2Q9HAU5 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC18.78■□□□□ 0.6
UPF2Q9HAU5 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
UPF2Q9HAU5 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
UPF2Q9HAU5 TCHH-202ENST00000614923 6995 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
UPF2Q9HAU5 C20orf203-202ENST00000608990 5076 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
UPF2Q9HAU5 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC18.78■□□□□ 0.6
UPF2Q9HAU5 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
UPF2Q9HAU5 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
UPF2Q9HAU5 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
UPF2Q9HAU5 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
UPF2Q9HAU5 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
UPF2Q9HAU5 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC18.78■□□□□ 0.6
UPF2Q9HAU5 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
UPF2Q9HAU5 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
UPF2Q9HAU5 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
UPF2Q9HAU5 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
UPF2Q9HAU5 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC18.78■□□□□ 0.6
UPF2Q9HAU5 TIMM8BP1-201ENST00000452384 211 ntBASIC18.78■□□□□ 0.6
UPF2Q9HAU5 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC18.78■□□□□ 0.6
UPF2Q9HAU5 KRT8P48-201ENST00000515599 1220 ntBASIC18.78■□□□□ 0.6
UPF2Q9HAU5 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC18.78■□□□□ 0.6
UPF2Q9HAU5 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC18.78■□□□□ 0.6
UPF2Q9HAU5 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC18.78■□□□□ 0.6
UPF2Q9HAU5 AC055717.3-201ENST00000622967 595 ntBASIC18.78■□□□□ 0.6
UPF2Q9HAU5 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC18.78■□□□□ 0.6
UPF2Q9HAU5 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC18.78■□□□□ 0.6
UPF2Q9HAU5 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
UPF2Q9HAU5 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC18.78■□□□□ 0.6
UPF2Q9HAU5 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
UPF2Q9HAU5 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC18.78■□□□□ 0.6
UPF2Q9HAU5 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC18.78■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms