Protein–RNA interactions for Protein: Q9H0A8

COMMD4, COMM domain-containing protein 4, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4Q9H0A8 AL645728.2-202ENST00000641679 227 ntBASIC13.54□□□□□ -0.24
COMMD4Q9H0A8 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
COMMD4Q9H0A8 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
COMMD4Q9H0A8 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
COMMD4Q9H0A8 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
COMMD4Q9H0A8 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
COMMD4Q9H0A8 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC13.54□□□□□ -0.24
COMMD4Q9H0A8 DENND3-202ENST00000424248 4740 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
COMMD4Q9H0A8 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC13.54□□□□□ -0.24
COMMD4Q9H0A8 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC13.54□□□□□ -0.24
COMMD4Q9H0A8 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
COMMD4Q9H0A8 ZBTB45P1-201ENST00000452761 1456 ntBASIC13.54□□□□□ -0.24
COMMD4Q9H0A8 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
COMMD4Q9H0A8 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
COMMD4Q9H0A8 ADAM11-201ENST00000200557 4571 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
COMMD4Q9H0A8 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
COMMD4Q9H0A8 MFF-204ENST00000353339 2186 ntTSL 5 BASIC13.54□□□□□ -0.24
COMMD4Q9H0A8 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
COMMD4Q9H0A8 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC13.53□□□□□ -0.24
COMMD4Q9H0A8 MTHFR-210ENST00000641407 2387 ntBASIC13.53□□□□□ -0.24
COMMD4Q9H0A8 PDXK-210ENST00000468090 7297 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
COMMD4Q9H0A8 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
COMMD4Q9H0A8 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
COMMD4Q9H0A8 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC13.53□□□□□ -0.24
COMMD4Q9H0A8 PPP2R1A-201ENST00000322088 5380 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
COMMD4Q9H0A8 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC13.53□□□□□ -0.24
COMMD4Q9H0A8 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
COMMD4Q9H0A8 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
COMMD4Q9H0A8 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
COMMD4Q9H0A8 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
COMMD4Q9H0A8 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
COMMD4Q9H0A8 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC13.53□□□□□ -0.24
COMMD4Q9H0A8 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC13.53□□□□□ -0.24
COMMD4Q9H0A8 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC13.53□□□□□ -0.24
COMMD4Q9H0A8 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC13.53□□□□□ -0.24
COMMD4Q9H0A8 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC13.53□□□□□ -0.24
COMMD4Q9H0A8 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC13.53□□□□□ -0.24
COMMD4Q9H0A8 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
COMMD4Q9H0A8 POLD2P1-201ENST00000511220 997 ntBASIC13.53□□□□□ -0.24
COMMD4Q9H0A8 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC13.53□□□□□ -0.24
COMMD4Q9H0A8 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC13.53□□□□□ -0.24
COMMD4Q9H0A8 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC13.53□□□□□ -0.24
COMMD4Q9H0A8 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC13.53□□□□□ -0.24
COMMD4Q9H0A8 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
COMMD4Q9H0A8 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC13.53□□□□□ -0.24
COMMD4Q9H0A8 ABR-228ENST00000574437 3196 ntTSL 5 BASIC13.53□□□□□ -0.24
COMMD4Q9H0A8 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
COMMD4Q9H0A8 KRT8P12-202ENST00000472924 1397 ntBASIC13.53□□□□□ -0.24
COMMD4Q9H0A8 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC13.53□□□□□ -0.24
COMMD4Q9H0A8 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
COMMD4Q9H0A8 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
COMMD4Q9H0A8 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
COMMD4Q9H0A8 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
COMMD4Q9H0A8 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
COMMD4Q9H0A8 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC13.53□□□□□ -0.24
COMMD4Q9H0A8 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
COMMD4Q9H0A8 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
COMMD4Q9H0A8 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC13.53□□□□□ -0.24
COMMD4Q9H0A8 TK1-203ENST00000588734 1681 ntTSL 2 BASIC13.53□□□□□ -0.24
COMMD4Q9H0A8 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
COMMD4Q9H0A8 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
COMMD4Q9H0A8 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC13.53□□□□□ -0.24
COMMD4Q9H0A8 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
COMMD4Q9H0A8 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
COMMD4Q9H0A8 AC113367.3-201ENST00000508316 1912 ntBASIC13.52□□□□□ -0.24
COMMD4Q9H0A8 AC117489.1-201ENST00000625169 3217 ntBASIC13.52□□□□□ -0.24
COMMD4Q9H0A8 CEMIP-202ENST00000356249 7297 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
COMMD4Q9H0A8 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
COMMD4Q9H0A8 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
COMMD4Q9H0A8 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
COMMD4Q9H0A8 FUK-202ENST00000378912 3925 ntTSL 2 BASIC13.52□□□□□ -0.24
COMMD4Q9H0A8 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC13.52□□□□□ -0.24
COMMD4Q9H0A8 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.24
COMMD4Q9H0A8 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC13.52□□□□□ -0.24
COMMD4Q9H0A8 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.24
COMMD4Q9H0A8 OCRL-202ENST00000371113 5162 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
COMMD4Q9H0A8 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
COMMD4Q9H0A8 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
COMMD4Q9H0A8 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
COMMD4Q9H0A8 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.25
COMMD4Q9H0A8 MTND6P24-201ENST00000440466 518 ntBASIC13.52□□□□□ -0.25
COMMD4Q9H0A8 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC13.52□□□□□ -0.25
COMMD4Q9H0A8 PFN2-205ENST00000461868 613 ntTSL 2 BASIC13.52□□□□□ -0.25
COMMD4Q9H0A8 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
COMMD4Q9H0A8 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC13.52□□□□□ -0.25
COMMD4Q9H0A8 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC13.52□□□□□ -0.25
COMMD4Q9H0A8 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC13.52□□□□□ -0.25
COMMD4Q9H0A8 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC13.52□□□□□ -0.25
COMMD4Q9H0A8 BANF1P1-201ENST00000553684 263 ntBASIC13.52□□□□□ -0.25
COMMD4Q9H0A8 CBFB-203ENST00000561924 584 ntTSL 5 BASIC13.52□□□□□ -0.25
COMMD4Q9H0A8 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC13.52□□□□□ -0.25
COMMD4Q9H0A8 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC13.52□□□□□ -0.25
COMMD4Q9H0A8 PRR29-209ENST00000582540 967 ntTSL 2 BASIC13.52□□□□□ -0.25
COMMD4Q9H0A8 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
COMMD4Q9H0A8 MIR6069-201ENST00000620069 79 ntBASIC13.52□□□□□ -0.25
COMMD4Q9H0A8 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
COMMD4Q9H0A8 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
COMMD4Q9H0A8 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
COMMD4Q9H0A8 VAPA-202ENST00000400000 6815 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
COMMD4Q9H0A8 SYNGR1-203ENST00000328933 4391 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms