Protein–RNA interactions for Protein: Q9C0H6

KLHL4, Kelch-like protein 4, humanhuman

Predictions only

Length 718 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL4Q9C0H6 MRVI1-204ENST00000527509 2686 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
KLHL4Q9C0H6 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
KLHL4Q9C0H6 TNFRSF11A-205ENST00000616710 3809 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
KLHL4Q9C0H6 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
KLHL4Q9C0H6 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC14.82□□□□□ -0.04
KLHL4Q9C0H6 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
KLHL4Q9C0H6 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
KLHL4Q9C0H6 SYBU-235ENST00000533895 3244 ntAPPRIS P4 TSL 1 (best) BASIC14.82□□□□□ -0.04
KLHL4Q9C0H6 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
KLHL4Q9C0H6 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC14.82□□□□□ -0.04
KLHL4Q9C0H6 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC14.82□□□□□ -0.04
KLHL4Q9C0H6 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC14.82□□□□□ -0.04
KLHL4Q9C0H6 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
KLHL4Q9C0H6 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
KLHL4Q9C0H6 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
KLHL4Q9C0H6 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
KLHL4Q9C0H6 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
KLHL4Q9C0H6 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC14.82□□□□□ -0.04
KLHL4Q9C0H6 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
KLHL4Q9C0H6 AL671277.1-201ENST00000429656 993 ntBASIC14.82□□□□□ -0.04
KLHL4Q9C0H6 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC14.82□□□□□ -0.04
KLHL4Q9C0H6 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC14.82□□□□□ -0.04
KLHL4Q9C0H6 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC14.82□□□□□ -0.04
KLHL4Q9C0H6 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC14.82□□□□□ -0.04
KLHL4Q9C0H6 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
KLHL4Q9C0H6 IGHV3OR16-6-201ENST00000568775 360 ntBASIC14.82□□□□□ -0.04
KLHL4Q9C0H6 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
KLHL4Q9C0H6 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
KLHL4Q9C0H6 CD7-202ENST00000578509 925 ntTSL 3 BASIC14.82□□□□□ -0.04
KLHL4Q9C0H6 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
KLHL4Q9C0H6 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
KLHL4Q9C0H6 AL161645.1-201ENST00000622716 1255 ntBASIC14.82□□□□□ -0.04
KLHL4Q9C0H6 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC14.82□□□□□ -0.04
KLHL4Q9C0H6 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
KLHL4Q9C0H6 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
KLHL4Q9C0H6 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
KLHL4Q9C0H6 SACM1L-201ENST00000389061 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
KLHL4Q9C0H6 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC14.82□□□□□ -0.04
KLHL4Q9C0H6 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC14.82□□□□□ -0.04
KLHL4Q9C0H6 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
KLHL4Q9C0H6 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
KLHL4Q9C0H6 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
KLHL4Q9C0H6 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
KLHL4Q9C0H6 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
KLHL4Q9C0H6 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC14.82□□□□□ -0.04
KLHL4Q9C0H6 FLI1-201ENST00000281428 4151 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
KLHL4Q9C0H6 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC14.81□□□□□ -0.04
KLHL4Q9C0H6 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
KLHL4Q9C0H6 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC14.81□□□□□ -0.04
KLHL4Q9C0H6 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC14.81□□□□□ -0.04
KLHL4Q9C0H6 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
KLHL4Q9C0H6 TCAF2-202ENST00000411935 2906 ntTSL 5 BASIC14.81□□□□□ -0.04
KLHL4Q9C0H6 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC14.81□□□□□ -0.04
KLHL4Q9C0H6 NPR1-202ENST00000368680 4236 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
KLHL4Q9C0H6 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC14.81□□□□□ -0.04
KLHL4Q9C0H6 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
KLHL4Q9C0H6 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
KLHL4Q9C0H6 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
KLHL4Q9C0H6 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
KLHL4Q9C0H6 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
KLHL4Q9C0H6 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC14.81□□□□□ -0.04
KLHL4Q9C0H6 SPDYE11-202ENST00000450699 704 ntBASIC14.81□□□□□ -0.04
KLHL4Q9C0H6 GATB-205ENST00000508611 605 ntTSL 2 BASIC14.81□□□□□ -0.04
KLHL4Q9C0H6 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC14.81□□□□□ -0.04
KLHL4Q9C0H6 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
KLHL4Q9C0H6 AC004449.1-201ENST00000564240 433 ntBASIC14.81□□□□□ -0.04
KLHL4Q9C0H6 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
KLHL4Q9C0H6 SPDYE9P-201ENST00000570642 692 ntBASIC14.81□□□□□ -0.04
KLHL4Q9C0H6 SPDYE10P-202ENST00000612005 668 ntBASIC14.81□□□□□ -0.04
KLHL4Q9C0H6 SPDYE8P-202ENST00000612377 668 ntBASIC14.81□□□□□ -0.04
KLHL4Q9C0H6 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
KLHL4Q9C0H6 AC105339.1-204ENST00000636249 355 ntBASIC14.81□□□□□ -0.04
KLHL4Q9C0H6 SYN2-205ENST00000620175 3871 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
KLHL4Q9C0H6 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC14.81□□□□□ -0.04
KLHL4Q9C0H6 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
KLHL4Q9C0H6 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC14.81□□□□□ -0.04
KLHL4Q9C0H6 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
KLHL4Q9C0H6 NR3C1-201ENST00000231509 3556 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
KLHL4Q9C0H6 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC14.81□□□□□ -0.04
KLHL4Q9C0H6 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
KLHL4Q9C0H6 HNRNPH1-204ENST00000442819 2248 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
KLHL4Q9C0H6 ALDH3A2-226ENST00000631291 3822 ntTSL 5 BASIC14.81□□□□□ -0.04
KLHL4Q9C0H6 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC14.81□□□□□ -0.04
KLHL4Q9C0H6 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC14.81□□□□□ -0.04
KLHL4Q9C0H6 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
KLHL4Q9C0H6 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
KLHL4Q9C0H6 RER1-207ENST00000488353 2469 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
KLHL4Q9C0H6 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
KLHL4Q9C0H6 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC14.81□□□□□ -0.04
KLHL4Q9C0H6 ANO9-201ENST00000332826 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
KLHL4Q9C0H6 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
KLHL4Q9C0H6 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
KLHL4Q9C0H6 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
KLHL4Q9C0H6 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC14.8□□□□□ -0.04
KLHL4Q9C0H6 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC14.8□□□□□ -0.04
KLHL4Q9C0H6 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
KLHL4Q9C0H6 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC14.8□□□□□ -0.04
KLHL4Q9C0H6 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
KLHL4Q9C0H6 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
KLHL4Q9C0H6 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms