Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
LINC00346Q8IVM7 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
LINC00346Q8IVM7 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
LINC00346Q8IVM7 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
LINC00346Q8IVM7 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
LINC00346Q8IVM7 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
LINC00346Q8IVM7 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
LINC00346Q8IVM7 TNN-203ENST00000622870 3719 ntTSL 5 BASIC13.56□□□□□ -0.24
LINC00346Q8IVM7 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
LINC00346Q8IVM7 AC007292.2-201ENST00000593524 1812 ntBASIC13.56□□□□□ -0.24
LINC00346Q8IVM7 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
LINC00346Q8IVM7 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
LINC00346Q8IVM7 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
LINC00346Q8IVM7 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC13.56□□□□□ -0.24
LINC00346Q8IVM7 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
LINC00346Q8IVM7 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
LINC00346Q8IVM7 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
LINC00346Q8IVM7 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC13.56□□□□□ -0.24
LINC00346Q8IVM7 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
LINC00346Q8IVM7 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC13.56□□□□□ -0.24
LINC00346Q8IVM7 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC13.56□□□□□ -0.24
LINC00346Q8IVM7 AC009477.1-201ENST00000452936 217 ntBASIC13.56□□□□□ -0.24
LINC00346Q8IVM7 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
LINC00346Q8IVM7 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC13.56□□□□□ -0.24
LINC00346Q8IVM7 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC13.56□□□□□ -0.24
LINC00346Q8IVM7 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
LINC00346Q8IVM7 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
LINC00346Q8IVM7 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC13.56□□□□□ -0.24
LINC00346Q8IVM7 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
LINC00346Q8IVM7 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
LINC00346Q8IVM7 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC13.56□□□□□ -0.24
LINC00346Q8IVM7 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
LINC00346Q8IVM7 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
LINC00346Q8IVM7 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
LINC00346Q8IVM7 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC13.56□□□□□ -0.24
LINC00346Q8IVM7 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
LINC00346Q8IVM7 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
LINC00346Q8IVM7 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
LINC00346Q8IVM7 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
LINC00346Q8IVM7 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
LINC00346Q8IVM7 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
LINC00346Q8IVM7 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC13.56□□□□□ -0.24
LINC00346Q8IVM7 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC13.56□□□□□ -0.24
LINC00346Q8IVM7 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
LINC00346Q8IVM7 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
LINC00346Q8IVM7 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
LINC00346Q8IVM7 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
LINC00346Q8IVM7 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
LINC00346Q8IVM7 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
LINC00346Q8IVM7 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC13.55□□□□□ -0.24
LINC00346Q8IVM7 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
LINC00346Q8IVM7 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC13.55□□□□□ -0.24
LINC00346Q8IVM7 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
LINC00346Q8IVM7 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC13.55□□□□□ -0.24
LINC00346Q8IVM7 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
LINC00346Q8IVM7 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC13.55□□□□□ -0.24
LINC00346Q8IVM7 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
LINC00346Q8IVM7 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
LINC00346Q8IVM7 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
LINC00346Q8IVM7 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
LINC00346Q8IVM7 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
LINC00346Q8IVM7 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC13.55□□□□□ -0.24
LINC00346Q8IVM7 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC13.55□□□□□ -0.24
LINC00346Q8IVM7 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC13.55□□□□□ -0.24
LINC00346Q8IVM7 AC055876.3-201ENST00000431496 288 ntBASIC13.55□□□□□ -0.24
LINC00346Q8IVM7 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC13.55□□□□□ -0.24
LINC00346Q8IVM7 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC13.55□□□□□ -0.24
LINC00346Q8IVM7 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC13.55□□□□□ -0.24
LINC00346Q8IVM7 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC13.55□□□□□ -0.24
LINC00346Q8IVM7 AC135586.1-201ENST00000539323 574 ntBASIC13.55□□□□□ -0.24
LINC00346Q8IVM7 AC092337.1-201ENST00000568699 1129 ntBASIC13.55□□□□□ -0.24
LINC00346Q8IVM7 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC13.55□□□□□ -0.24
LINC00346Q8IVM7 GPX4-206ENST00000588919 803 ntTSL 2 BASIC13.55□□□□□ -0.24
LINC00346Q8IVM7 AC000095.1-201ENST00000603208 874 ntBASIC13.55□□□□□ -0.24
LINC00346Q8IVM7 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC13.55□□□□□ -0.24
LINC00346Q8IVM7 AC008738.7-201ENST00000609744 511 ntBASIC13.55□□□□□ -0.24
LINC00346Q8IVM7 AC138649.4-201ENST00000612222 287 ntBASIC13.55□□□□□ -0.24
LINC00346Q8IVM7 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC13.55□□□□□ -0.24
LINC00346Q8IVM7 SERF2-217ENST00000630046 862 ntTSL 5 BASIC13.55□□□□□ -0.24
LINC00346Q8IVM7 AC004840.1-201ENST00000636359 365 ntBASIC13.55□□□□□ -0.24
LINC00346Q8IVM7 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC13.55□□□□□ -0.24
LINC00346Q8IVM7 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
LINC00346Q8IVM7 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
LINC00346Q8IVM7 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC13.55□□□□□ -0.24
LINC00346Q8IVM7 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
LINC00346Q8IVM7 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
LINC00346Q8IVM7 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC13.55□□□□□ -0.24
LINC00346Q8IVM7 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
LINC00346Q8IVM7 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
LINC00346Q8IVM7 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
LINC00346Q8IVM7 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
LINC00346Q8IVM7 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
LINC00346Q8IVM7 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
LINC00346Q8IVM7 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
LINC00346Q8IVM7 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC13.55□□□□□ -0.24
LINC00346Q8IVM7 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
LINC00346Q8IVM7 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.24
LINC00346Q8IVM7 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC13.55□□□□□ -0.24
LINC00346Q8IVM7 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
LINC00346Q8IVM7 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms