Protein–RNA interactions for Protein: Q86VV8

RTTN, Rotatin, humanhuman

Predictions only

Length 2,226 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTTNQ86VV8 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
RTTNQ86VV8 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC13.55□□□□□ -0.24
RTTNQ86VV8 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
RTTNQ86VV8 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
RTTNQ86VV8 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
RTTNQ86VV8 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.24
RTTNQ86VV8 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
RTTNQ86VV8 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC13.55□□□□□ -0.24
RTTNQ86VV8 AGAP7P-201ENST00000582299 2062 ntBASIC13.55□□□□□ -0.24
RTTNQ86VV8 AGAP14-201ENST00000624701 2060 ntBASIC13.55□□□□□ -0.24
RTTNQ86VV8 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC13.55□□□□□ -0.24
RTTNQ86VV8 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
RTTNQ86VV8 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC13.55□□□□□ -0.24
RTTNQ86VV8 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
RTTNQ86VV8 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC13.55□□□□□ -0.24
RTTNQ86VV8 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
RTTNQ86VV8 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC13.55□□□□□ -0.24
RTTNQ86VV8 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
RTTNQ86VV8 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
RTTNQ86VV8 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
RTTNQ86VV8 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC13.55□□□□□ -0.24
RTTNQ86VV8 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
RTTNQ86VV8 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
RTTNQ86VV8 USP35-204ENST00000530267 2419 ntTSL 2 BASIC13.55□□□□□ -0.24
RTTNQ86VV8 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
RTTNQ86VV8 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
RTTNQ86VV8 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
RTTNQ86VV8 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
RTTNQ86VV8 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
RTTNQ86VV8 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
RTTNQ86VV8 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
RTTNQ86VV8 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC13.55□□□□□ -0.24
RTTNQ86VV8 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC13.55□□□□□ -0.24
RTTNQ86VV8 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC13.55□□□□□ -0.24
RTTNQ86VV8 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC13.55□□□□□ -0.24
RTTNQ86VV8 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC13.55□□□□□ -0.24
RTTNQ86VV8 RARRES2P5-201ENST00000564013 466 ntBASIC13.55□□□□□ -0.24
RTTNQ86VV8 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
RTTNQ86VV8 MIR6727-201ENST00000620702 65 ntBASIC13.55□□□□□ -0.24
RTTNQ86VV8 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
RTTNQ86VV8 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC13.55□□□□□ -0.24
RTTNQ86VV8 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC13.55□□□□□ -0.24
RTTNQ86VV8 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
RTTNQ86VV8 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
RTTNQ86VV8 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
RTTNQ86VV8 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
RTTNQ86VV8 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
RTTNQ86VV8 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
RTTNQ86VV8 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
RTTNQ86VV8 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC13.54□□□□□ -0.24
RTTNQ86VV8 LRRFIP1-202ENST00000289175 3709 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
RTTNQ86VV8 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
RTTNQ86VV8 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
RTTNQ86VV8 LANCL3-202ENST00000378621 10298 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
RTTNQ86VV8 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
RTTNQ86VV8 NEFH-201ENST00000310624 3783 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
RTTNQ86VV8 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
RTTNQ86VV8 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
RTTNQ86VV8 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
RTTNQ86VV8 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
RTTNQ86VV8 RHOA-206ENST00000454011 889 ntTSL 2 BASIC13.54□□□□□ -0.24
RTTNQ86VV8 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
RTTNQ86VV8 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC13.54□□□□□ -0.24
RTTNQ86VV8 AC008735.3-201ENST00000596646 500 ntBASIC13.54□□□□□ -0.24
RTTNQ86VV8 AC008494.3-201ENST00000606615 944 ntBASIC13.54□□□□□ -0.24
RTTNQ86VV8 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
RTTNQ86VV8 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
RTTNQ86VV8 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC13.54□□□□□ -0.24
RTTNQ86VV8 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
RTTNQ86VV8 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC13.54□□□□□ -0.24
RTTNQ86VV8 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
RTTNQ86VV8 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
RTTNQ86VV8 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
RTTNQ86VV8 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC13.54□□□□□ -0.24
RTTNQ86VV8 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC13.54□□□□□ -0.24
RTTNQ86VV8 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
RTTNQ86VV8 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC13.54□□□□□ -0.24
RTTNQ86VV8 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC13.54□□□□□ -0.24
RTTNQ86VV8 PHF14-201ENST00000403050 4276 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
RTTNQ86VV8 CICP24-201ENST00000605464 2705 ntBASIC13.54□□□□□ -0.24
RTTNQ86VV8 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC13.54□□□□□ -0.24
RTTNQ86VV8 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
RTTNQ86VV8 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC13.54□□□□□ -0.24
RTTNQ86VV8 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
RTTNQ86VV8 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC13.54□□□□□ -0.24
RTTNQ86VV8 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
RTTNQ86VV8 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
RTTNQ86VV8 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
RTTNQ86VV8 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC13.54□□□□□ -0.24
RTTNQ86VV8 ACTBP11-201ENST00000436287 1126 ntBASIC13.54□□□□□ -0.24
RTTNQ86VV8 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC13.54□□□□□ -0.24
RTTNQ86VV8 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC13.54□□□□□ -0.24
RTTNQ86VV8 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC13.54□□□□□ -0.24
RTTNQ86VV8 AC023310.3-201ENST00000557027 670 ntBASIC13.54□□□□□ -0.24
RTTNQ86VV8 AC100756.1-201ENST00000562736 682 ntBASIC13.54□□□□□ -0.24
RTTNQ86VV8 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC13.54□□□□□ -0.24
RTTNQ86VV8 AC138749.3-201ENST00000567691 622 ntBASIC13.54□□□□□ -0.24
RTTNQ86VV8 AC116165.1-201ENST00000611806 668 ntBASIC13.54□□□□□ -0.24
RTTNQ86VV8 AC007431.3-201ENST00000623221 587 ntBASIC13.54□□□□□ -0.24
RTTNQ86VV8 AL645728.2-202ENST00000641679 227 ntBASIC13.54□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 67.3 ms