Protein–RNA interactions for Protein: Q587J8

KHDC3L, KHDC3-like protein, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KHDC3LQ587J8 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
KHDC3LQ587J8 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC12.23□□□□□ -0.45
KHDC3LQ587J8 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC12.23□□□□□ -0.45
KHDC3LQ587J8 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC12.23□□□□□ -0.45
KHDC3LQ587J8 KIAA1217-203ENST00000376452 6052 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
KHDC3LQ587J8 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
KHDC3LQ587J8 MED12L-202ENST00000309237 2862 ntAPPRIS ALT2 TSL 2 BASIC12.23□□□□□ -0.45
KHDC3LQ587J8 ADAM17-204ENST00000618923 1881 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
KHDC3LQ587J8 PCDH8-201ENST00000338862 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC12.23□□□□□ -0.45
KHDC3LQ587J8 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC12.23□□□□□ -0.45
KHDC3LQ587J8 FZD6-206ENST00000523739 2774 ntTSL 2 BASIC12.23□□□□□ -0.45
KHDC3LQ587J8 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
KHDC3LQ587J8 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC12.23□□□□□ -0.45
KHDC3LQ587J8 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
KHDC3LQ587J8 LINC01873-201ENST00000428647 1679 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
KHDC3LQ587J8 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC12.22□□□□□ -0.45
KHDC3LQ587J8 ABCA2-203ENST00000371605 8151 ntAPPRIS ALT2 TSL 2 BASIC12.22□□□□□ -0.45
KHDC3LQ587J8 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC12.22□□□□□ -0.45
KHDC3LQ587J8 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC12.22□□□□□ -0.45
KHDC3LQ587J8 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
KHDC3LQ587J8 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC12.22□□□□□ -0.45
KHDC3LQ587J8 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
KHDC3LQ587J8 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
KHDC3LQ587J8 SF1-202ENST00000334944 3094 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
KHDC3LQ587J8 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
KHDC3LQ587J8 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC12.22□□□□□ -0.45
KHDC3LQ587J8 AC015818.8-201ENST00000587907 1519 ntBASIC12.22□□□□□ -0.45
KHDC3LQ587J8 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
KHDC3LQ587J8 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC12.22□□□□□ -0.45
KHDC3LQ587J8 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC12.22□□□□□ -0.45
KHDC3LQ587J8 MYOM3-202ENST00000374434 5804 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
KHDC3LQ587J8 GDAP1L1-206ENST00000537864 2855 ntTSL 2 BASIC12.22□□□□□ -0.45
KHDC3LQ587J8 AC023090.2-201ENST00000625182 2110 ntBASIC12.22□□□□□ -0.45
KHDC3LQ587J8 STAT4-202ENST00000392320 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
KHDC3LQ587J8 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
KHDC3LQ587J8 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
KHDC3LQ587J8 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC12.22□□□□□ -0.45
KHDC3LQ587J8 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
KHDC3LQ587J8 DCHS1-201ENST00000299441 10765 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
KHDC3LQ587J8 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
KHDC3LQ587J8 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC12.22□□□□□ -0.45
KHDC3LQ587J8 RBP1-203ENST00000483943 1935 ntTSL 2 BASIC12.22□□□□□ -0.45
KHDC3LQ587J8 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
KHDC3LQ587J8 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
KHDC3LQ587J8 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC12.22□□□□□ -0.45
KHDC3LQ587J8 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
KHDC3LQ587J8 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
KHDC3LQ587J8 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC12.22□□□□□ -0.45
KHDC3LQ587J8 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC12.22□□□□□ -0.45
KHDC3LQ587J8 AC108751.1-201ENST00000490852 363 ntBASIC12.22□□□□□ -0.45
KHDC3LQ587J8 RNPS1P1-201ENST00000507437 918 ntBASIC12.22□□□□□ -0.45
KHDC3LQ587J8 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC12.22□□□□□ -0.45
KHDC3LQ587J8 AF238378.1-201ENST00000526806 358 ntBASIC12.22□□□□□ -0.45
KHDC3LQ587J8 POLD4-207ENST00000531239 584 ntTSL 2 BASIC12.22□□□□□ -0.45
KHDC3LQ587J8 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC12.22□□□□□ -0.45
KHDC3LQ587J8 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC12.22□□□□□ -0.45
KHDC3LQ587J8 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC12.22□□□□□ -0.45
KHDC3LQ587J8 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC12.22□□□□□ -0.45
KHDC3LQ587J8 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
KHDC3LQ587J8 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
KHDC3LQ587J8 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
KHDC3LQ587J8 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
KHDC3LQ587J8 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
KHDC3LQ587J8 RIPOR3-202ENST00000327979 4377 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
KHDC3LQ587J8 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC12.22□□□□□ -0.45
KHDC3LQ587J8 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC12.22□□□□□ -0.45
KHDC3LQ587J8 AC068075.1-201ENST00000519714 1832 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
KHDC3LQ587J8 AL731571.1-201ENST00000617058 5428 ntBASIC12.22□□□□□ -0.45
KHDC3LQ587J8 VTI1B-204ENST00000554659 5351 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
KHDC3LQ587J8 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
KHDC3LQ587J8 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC12.22□□□□□ -0.45
KHDC3LQ587J8 AL031595.1-201ENST00000623969 4709 ntBASIC12.22□□□□□ -0.45
KHDC3LQ587J8 SPG11-210ENST00000558319 6426 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
KHDC3LQ587J8 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC12.22□□□□□ -0.45
KHDC3LQ587J8 SCARB2-227ENST00000640957 3255 ntAPPRIS ALT1 TSL 5 BASIC12.22□□□□□ -0.45
KHDC3LQ587J8 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
KHDC3LQ587J8 HGNC:18790-201ENST00000397958 2650 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
KHDC3LQ587J8 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
KHDC3LQ587J8 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
KHDC3LQ587J8 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
KHDC3LQ587J8 CNTN1-203ENST00000547702 3033 ntTSL 2 BASIC12.21□□□□□ -0.45
KHDC3LQ587J8 TNK1-207ENST00000576812 3023 ntAPPRIS ALT1 TSL 1 (best) BASIC12.21□□□□□ -0.45
KHDC3LQ587J8 SETD1A-201ENST00000262519 6451 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
KHDC3LQ587J8 AAR2-201ENST00000320849 2430 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
KHDC3LQ587J8 PSME3-203ENST00000541124 3366 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
KHDC3LQ587J8 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
KHDC3LQ587J8 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
KHDC3LQ587J8 DDX31-204ENST00000372159 4577 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
KHDC3LQ587J8 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC12.21□□□□□ -0.45
KHDC3LQ587J8 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC12.21□□□□□ -0.45
KHDC3LQ587J8 PEG13-201ENST00000631594 5667 ntBASIC12.21□□□□□ -0.45
KHDC3LQ587J8 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
KHDC3LQ587J8 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC12.21□□□□□ -0.45
KHDC3LQ587J8 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC12.21□□□□□ -0.45
KHDC3LQ587J8 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
KHDC3LQ587J8 FALEC-201ENST00000416894 566 ntTSL 3 BASIC12.21□□□□□ -0.45
KHDC3LQ587J8 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC12.21□□□□□ -0.45
KHDC3LQ587J8 AC098859.1-201ENST00000502915 1238 ntBASIC12.21□□□□□ -0.45
KHDC3LQ587J8 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC12.21□□□□□ -0.45
KHDC3LQ587J8 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC12.21□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 60.6 ms