Protein–RNA interactions for Protein: P62491

RAB11A, Ras-related protein Rab-11A, humanhuman

Predictions only

Length 216 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11AP62491 SAMD4A-202ENST00000392067 6833 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
RAB11AP62491 TICRR-201ENST00000268138 6775 ntAPPRIS P3 TSL 5 BASIC12.49□□□□□ -0.41
RAB11AP62491 MTMR3-204ENST00000401950 6018 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
RAB11AP62491 GET4-202ENST00000407192 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
RAB11AP62491 RET-205ENST00000615310 4337 ntTSL 5 BASIC12.49□□□□□ -0.41
RAB11AP62491 MSRB3-202ENST00000355192 4289 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
RAB11AP62491 SNAP91-215ENST00000521743 4263 ntAPPRIS P2 TSL 5 BASIC12.49□□□□□ -0.41
RAB11AP62491 SYNGAP1-208ENST00000629380 9862 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
RAB11AP62491 IRS1-201ENST00000305123 9705 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
RAB11AP62491 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC12.49□□□□□ -0.41
RAB11AP62491 FLNC-202ENST00000346177 9042 ntAPPRIS ALT1 TSL 1 (best) BASIC12.49□□□□□ -0.41
RAB11AP62491 CARHSP1-220ENST00000619881 2849 ntAPPRIS P1 TSL 3 BASIC12.49□□□□□ -0.41
RAB11AP62491 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
RAB11AP62491 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
RAB11AP62491 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
RAB11AP62491 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC12.49□□□□□ -0.41
RAB11AP62491 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
RAB11AP62491 EPB41L1-202ENST00000338074 6266 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
RAB11AP62491 MTA3-202ENST00000405592 5832 ntTSL 2 BASIC12.49□□□□□ -0.41
RAB11AP62491 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
RAB11AP62491 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC12.49□□□□□ -0.41
RAB11AP62491 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC12.49□□□□□ -0.41
RAB11AP62491 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
RAB11AP62491 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC12.49□□□□□ -0.41
RAB11AP62491 JMJD6-203ENST00000445478 5303 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
RAB11AP62491 STRCP1-201ENST00000509801 5328 ntBASIC12.49□□□□□ -0.41
RAB11AP62491 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
RAB11AP62491 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
RAB11AP62491 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC12.49□□□□□ -0.41
RAB11AP62491 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
RAB11AP62491 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
RAB11AP62491 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
RAB11AP62491 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
RAB11AP62491 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
RAB11AP62491 GPT2-201ENST00000340124 3984 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
RAB11AP62491 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
RAB11AP62491 FBN3-207ENST00000601739 9086 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
RAB11AP62491 SHPK-201ENST00000225519 3838 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
RAB11AP62491 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
RAB11AP62491 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC12.49□□□□□ -0.41
RAB11AP62491 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
RAB11AP62491 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC12.49□□□□□ -0.41
RAB11AP62491 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC12.49□□□□□ -0.41
RAB11AP62491 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC12.49□□□□□ -0.41
RAB11AP62491 EEF1DP4-201ENST00000446006 880 ntBASIC12.49□□□□□ -0.41
RAB11AP62491 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC12.49□□□□□ -0.41
RAB11AP62491 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
RAB11AP62491 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
RAB11AP62491 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC12.49□□□□□ -0.41
RAB11AP62491 PDPK2P-202ENST00000562415 1191 ntBASIC12.49□□□□□ -0.41
RAB11AP62491 AP002472.1-201ENST00000577490 586 ntBASIC12.49□□□□□ -0.41
RAB11AP62491 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC12.49□□□□□ -0.41
RAB11AP62491 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC12.49□□□□□ -0.41
RAB11AP62491 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC12.49□□□□□ -0.41
RAB11AP62491 SLC4A7-214ENST00000455077 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
RAB11AP62491 AGL-203ENST00000361915 7368 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
RAB11AP62491 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
RAB11AP62491 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
RAB11AP62491 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
RAB11AP62491 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
RAB11AP62491 KDM5C-208ENST00000452825 6096 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
RAB11AP62491 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
RAB11AP62491 C11orf87-201ENST00000327419 5884 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
RAB11AP62491 KIF6-203ENST00000394362 2394 ntTSL 5 BASIC12.49□□□□□ -0.41
RAB11AP62491 NRIP3-201ENST00000309166 3809 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
RAB11AP62491 WNT5A-202ENST00000474267 6042 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
RAB11AP62491 OFD1-204ENST00000398395 3307 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
RAB11AP62491 MKL1-202ENST00000396617 4505 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
RAB11AP62491 HSPA7-201ENST00000445535 1927 ntBASIC12.49□□□□□ -0.41
RAB11AP62491 TRIM11-204ENST00000493030 5774 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
RAB11AP62491 MBLAC2-202ENST00000514906 1936 ntBASIC12.49□□□□□ -0.41
RAB11AP62491 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
RAB11AP62491 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
RAB11AP62491 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
RAB11AP62491 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
RAB11AP62491 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC12.48□□□□□ -0.41
RAB11AP62491 USP22-201ENST00000261497 5220 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
RAB11AP62491 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
RAB11AP62491 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC12.48□□□□□ -0.41
RAB11AP62491 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
RAB11AP62491 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC12.48□□□□□ -0.41
RAB11AP62491 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
RAB11AP62491 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC12.48□□□□□ -0.41
RAB11AP62491 ARAP1-201ENST00000334211 4942 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
RAB11AP62491 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
RAB11AP62491 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
RAB11AP62491 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
RAB11AP62491 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
RAB11AP62491 SEPT7-202ENST00000399034 4399 ntTSL 5 BASIC12.48□□□□□ -0.41
RAB11AP62491 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
RAB11AP62491 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC12.48□□□□□ -0.41
RAB11AP62491 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
RAB11AP62491 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
RAB11AP62491 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC12.48□□□□□ -0.41
RAB11AP62491 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
RAB11AP62491 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
RAB11AP62491 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
RAB11AP62491 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
RAB11AP62491 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
RAB11AP62491 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 93.7 ms