Protein–RNA interactions for Protein: P61020

RAB5B, Ras-related protein Rab-5B, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5BP61020 PTCHD3-201ENST00000438700 2529 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
RAB5BP61020 FAM90A11P-201ENST00000518378 2218 ntBASIC11.94□□□□□ -0.5
RAB5BP61020 LMCD1-201ENST00000157600 8405 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
RAB5BP61020 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
RAB5BP61020 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
RAB5BP61020 ATP13A2-203ENST00000452699 3981 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
RAB5BP61020 UBN1-202ENST00000396658 6336 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
RAB5BP61020 TAGLN-207ENST00000532870 2166 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
RAB5BP61020 AC110048.1-201ENST00000604293 2157 ntBASIC11.94□□□□□ -0.5
RAB5BP61020 ADAM19-203ENST00000517905 3312 ntTSL 5 BASIC11.94□□□□□ -0.5
RAB5BP61020 PIK3R1-213ENST00000521657 3891 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
RAB5BP61020 SAP30BP-202ENST00000355423 2439 ntTSL 2 BASIC11.94□□□□□ -0.5
RAB5BP61020 EPS15L1-202ENST00000455140 3266 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
RAB5BP61020 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
RAB5BP61020 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
RAB5BP61020 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC11.94□□□□□ -0.5
RAB5BP61020 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
RAB5BP61020 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC11.94□□□□□ -0.5
RAB5BP61020 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
RAB5BP61020 AP000523.1-201ENST00000398242 1049 ntBASIC11.94□□□□□ -0.5
RAB5BP61020 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC11.94□□□□□ -0.5
RAB5BP61020 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC11.94□□□□□ -0.5
RAB5BP61020 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
RAB5BP61020 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
RAB5BP61020 AC009947.2-201ENST00000444014 672 ntBASIC11.94□□□□□ -0.5
RAB5BP61020 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
RAB5BP61020 AC034232.1-201ENST00000506026 1064 ntBASIC11.94□□□□□ -0.5
RAB5BP61020 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC11.94□□□□□ -0.5
RAB5BP61020 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
RAB5BP61020 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
RAB5BP61020 AC006058.3-201ENST00000606217 1069 ntBASIC11.94□□□□□ -0.5
RAB5BP61020 CYB5RL-201ENST00000287899 5777 ntTSL 3 BASIC11.94□□□□□ -0.5
RAB5BP61020 CPPED1-202ENST00000381774 6273 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
RAB5BP61020 ATP11A-202ENST00000375645 8795 ntAPPRIS P2 TSL 5 BASIC11.94□□□□□ -0.5
RAB5BP61020 HOXB13-201ENST00000290295 3467 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
RAB5BP61020 RNF43-205ENST00000581868 2610 ntTSL 2 BASIC11.94□□□□□ -0.5
RAB5BP61020 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
RAB5BP61020 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
RAB5BP61020 ZNF606-201ENST00000341164 4248 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
RAB5BP61020 MAMDC4-201ENST00000317446 3658 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
RAB5BP61020 CLCNKB-202ENST00000375679 2567 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
RAB5BP61020 POLDIP3-209ENST00000617178 2006 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
RAB5BP61020 ABCA17P-202ENST00000469908 4188 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
RAB5BP61020 TMEM104-204ENST00000582330 4679 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
RAB5BP61020 AC004834.1-202ENST00000638785 1737 ntTSL 5 BASIC11.94□□□□□ -0.5
RAB5BP61020 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC11.94□□□□□ -0.5
RAB5BP61020 PDE9A-202ENST00000328862 1956 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
RAB5BP61020 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
RAB5BP61020 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC11.94□□□□□ -0.5
RAB5BP61020 STXBP6-202ENST00000396700 4021 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
RAB5BP61020 CELF2-216ENST00000637215 2724 ntTSL 5 BASIC11.94□□□□□ -0.5
RAB5BP61020 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
RAB5BP61020 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
RAB5BP61020 HNRNPRP1-201ENST00000453465 1695 ntBASIC11.94□□□□□ -0.5
RAB5BP61020 CTNNB1-201ENST00000349496 3737 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
RAB5BP61020 FAM122B-203ENST00000370790 4246 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
RAB5BP61020 PDZD4-209ENST00000544474 3418 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
RAB5BP61020 KNDC1-202ENST00000368571 3925 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
RAB5BP61020 TMEM57-201ENST00000374343 3917 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
RAB5BP61020 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
RAB5BP61020 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
RAB5BP61020 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
RAB5BP61020 FRMD1-205ENST00000440994 2857 ntAPPRIS ALT2 TSL 2 BASIC11.93□□□□□ -0.5
RAB5BP61020 EBF2-203ENST00000520164 5145 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
RAB5BP61020 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
RAB5BP61020 GZF1-202ENST00000377051 4740 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
RAB5BP61020 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
RAB5BP61020 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
RAB5BP61020 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
RAB5BP61020 MAML3-203ENST00000509479 6844 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
RAB5BP61020 OSBPL1A-201ENST00000319481 4195 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
RAB5BP61020 CACUL1-201ENST00000369151 11311 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
RAB5BP61020 SLC52A1-203ENST00000512825 2989 ntTSL 2 BASIC11.93□□□□□ -0.5
RAB5BP61020 SRC-204ENST00000373578 4630 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
RAB5BP61020 NFKB1-202ENST00000394820 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
RAB5BP61020 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
RAB5BP61020 CYB561D1-206ENST00000496961 3424 ntTSL 2 BASIC11.93□□□□□ -0.5
RAB5BP61020 PDE4A-204ENST00000440014 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
RAB5BP61020 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC11.93□□□□□ -0.5
RAB5BP61020 KCNS2-202ENST00000521839 4340 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
RAB5BP61020 MKL1-205ENST00000407029 4091 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
RAB5BP61020 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
RAB5BP61020 TTYH3-204ENST00000407643 4537 ntTSL 5 BASIC11.93□□□□□ -0.5
RAB5BP61020 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
RAB5BP61020 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
RAB5BP61020 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
RAB5BP61020 SAPCD2P4-201ENST00000424595 1171 ntBASIC11.93□□□□□ -0.5
RAB5BP61020 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC11.93□□□□□ -0.5
RAB5BP61020 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC11.93□□□□□ -0.5
RAB5BP61020 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC11.93□□□□□ -0.5
RAB5BP61020 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC11.93□□□□□ -0.5
RAB5BP61020 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC11.93□□□□□ -0.5
RAB5BP61020 DAXX-202ENST00000374542 2613 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
RAB5BP61020 GTF2I-215ENST00000614986 4415 ntAPPRIS ALT1 TSL 1 (best) BASIC11.93□□□□□ -0.5
RAB5BP61020 GTF2I-221ENST00000621734 4412 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
RAB5BP61020 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
RAB5BP61020 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
RAB5BP61020 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC11.93□□□□□ -0.5
RAB5BP61020 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC11.93□□□□□ -0.5
RAB5BP61020 PI4KAP2-211ENST00000486209 3213 ntTSL 5 BASIC11.93□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms