Protein–RNA interactions for Protein: P49959

MRE11, Double-strand break repair protein MRE11, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11P49959 GP6-201ENST00000310373 2268 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
MRE11P49959 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC17.9■□□□□ 0.46
MRE11P49959 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
MRE11P49959 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
MRE11P49959 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC17.9■□□□□ 0.46
MRE11P49959 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC17.9■□□□□ 0.46
MRE11P49959 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC17.9■□□□□ 0.46
MRE11P49959 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC17.9■□□□□ 0.46
MRE11P49959 AC004461.1-201ENST00000412461 403 ntBASIC17.9■□□□□ 0.46
MRE11P49959 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC17.9■□□□□ 0.46
MRE11P49959 LGALS9C-215ENST00000584941 1104 ntTSL 5 BASIC17.9■□□□□ 0.46
MRE11P49959 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC17.9■□□□□ 0.46
MRE11P49959 CYGB-205ENST00000590175 830 ntTSL 3 BASIC17.9■□□□□ 0.46
MRE11P49959 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC17.9■□□□□ 0.46
MRE11P49959 NFATC1-205ENST00000427363 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
MRE11P49959 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
MRE11P49959 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC17.9■□□□□ 0.46
MRE11P49959 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
MRE11P49959 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
MRE11P49959 PML-203ENST00000354026 2885 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
MRE11P49959 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC17.9■□□□□ 0.46
MRE11P49959 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
MRE11P49959 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
MRE11P49959 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
MRE11P49959 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
MRE11P49959 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
MRE11P49959 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
MRE11P49959 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
MRE11P49959 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.46
MRE11P49959 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC17.89■□□□□ 0.46
MRE11P49959 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
MRE11P49959 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
MRE11P49959 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC17.89■□□□□ 0.45
MRE11P49959 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
MRE11P49959 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
MRE11P49959 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC17.89■□□□□ 0.45
MRE11P49959 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
MRE11P49959 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
MRE11P49959 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC17.89■□□□□ 0.45
MRE11P49959 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC17.89■□□□□ 0.45
MRE11P49959 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
MRE11P49959 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
MRE11P49959 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
MRE11P49959 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
MRE11P49959 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
MRE11P49959 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC17.89■□□□□ 0.45
MRE11P49959 SLBP-205ENST00000488267 987 ntTSL 2 BASIC17.89■□□□□ 0.45
MRE11P49959 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC17.89■□□□□ 0.45
MRE11P49959 IGHV3-71-201ENST00000523324 359 ntBASIC17.89■□□□□ 0.45
MRE11P49959 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
MRE11P49959 AC006557.2-201ENST00000592985 1240 ntBASIC17.89■□□□□ 0.45
MRE11P49959 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC17.89■□□□□ 0.45
MRE11P49959 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
MRE11P49959 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC17.89■□□□□ 0.45
MRE11P49959 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
MRE11P49959 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
MRE11P49959 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
MRE11P49959 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
MRE11P49959 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
MRE11P49959 AC005562.1-201ENST00000583030 3219 ntBASIC17.89■□□□□ 0.45
MRE11P49959 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC17.89■□□□□ 0.45
MRE11P49959 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
MRE11P49959 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
MRE11P49959 PLA2G3-201ENST00000215885 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
MRE11P49959 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC17.89■□□□□ 0.45
MRE11P49959 AC018529.2-202ENST00000611482 3087 ntBASIC17.89■□□□□ 0.45
MRE11P49959 FAM156A-221ENST00000622447 3757 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
MRE11P49959 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
MRE11P49959 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC17.89■□□□□ 0.45
MRE11P49959 LILRB5-203ENST00000449561 2137 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
MRE11P49959 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
MRE11P49959 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
MRE11P49959 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC17.89■□□□□ 0.45
MRE11P49959 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
MRE11P49959 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
MRE11P49959 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
MRE11P49959 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC17.88■□□□□ 0.45
MRE11P49959 MFSD11-217ENST00000590514 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
MRE11P49959 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
MRE11P49959 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
MRE11P49959 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
MRE11P49959 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
MRE11P49959 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC17.88■□□□□ 0.45
MRE11P49959 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC17.88■□□□□ 0.45
MRE11P49959 LINC00987-201ENST00000427111 2472 ntTSL 2 BASIC17.88■□□□□ 0.45
MRE11P49959 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
MRE11P49959 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
MRE11P49959 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
MRE11P49959 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
MRE11P49959 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
MRE11P49959 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
MRE11P49959 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC17.88■□□□□ 0.45
MRE11P49959 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
MRE11P49959 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC17.88■□□□□ 0.45
MRE11P49959 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
MRE11P49959 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC17.88■□□□□ 0.45
MRE11P49959 HNRNPFP1-201ENST00000391730 1133 ntBASIC17.88■□□□□ 0.45
MRE11P49959 RAC2-202ENST00000401529 569 ntTSL 4 BASIC17.88■□□□□ 0.45
MRE11P49959 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
MRE11P49959 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC17.88■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms