Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
SRP9P49458 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC13.63□□□□□ -0.23
SRP9P49458 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
SRP9P49458 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
SRP9P49458 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SRP9P49458 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC13.63□□□□□ -0.23
SRP9P49458 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
SRP9P49458 SERBP1P3-201ENST00000459980 809 ntBASIC13.63□□□□□ -0.23
SRP9P49458 HLA-V-204ENST00000476601 1289 ntBASIC13.63□□□□□ -0.23
SRP9P49458 SATB1-217ENST00000493952 626 ntTSL 3 BASIC13.63□□□□□ -0.23
SRP9P49458 CCDC74BP1-201ENST00000508880 1123 ntBASIC13.63□□□□□ -0.23
SRP9P49458 IGHV3-42-201ENST00000520410 361 ntBASIC13.63□□□□□ -0.23
SRP9P49458 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC13.63□□□□□ -0.23
SRP9P49458 RPL28-205ENST00000558131 444 ntTSL 5 BASIC13.63□□□□□ -0.23
SRP9P49458 AL158211.3-201ENST00000607385 239 ntBASIC13.63□□□□□ -0.23
SRP9P49458 GPER1-207ENST00000619052 571 ntTSL 2 BASIC13.63□□□□□ -0.23
SRP9P49458 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
SRP9P49458 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC13.63□□□□□ -0.23
SRP9P49458 AC073592.8-201ENST00000624126 511 ntBASIC13.63□□□□□ -0.23
SRP9P49458 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC13.63□□□□□ -0.23
SRP9P49458 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
SRP9P49458 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SRP9P49458 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC13.63□□□□□ -0.23
SRP9P49458 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SRP9P49458 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SRP9P49458 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SRP9P49458 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
SRP9P49458 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
SRP9P49458 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
SRP9P49458 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC13.63□□□□□ -0.23
SRP9P49458 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
SRP9P49458 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC13.63□□□□□ -0.23
SRP9P49458 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SRP9P49458 NUTM2E-201ENST00000429984 3292 ntAPPRIS P5 TSL 5 BASIC13.63□□□□□ -0.23
SRP9P49458 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
SRP9P49458 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
SRP9P49458 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
SRP9P49458 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC13.63□□□□□ -0.23
SRP9P49458 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SRP9P49458 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC13.62□□□□□ -0.23
SRP9P49458 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
SRP9P49458 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
SRP9P49458 ADCY7-208ENST00000566433 2535 ntTSL 5 BASIC13.62□□□□□ -0.23
SRP9P49458 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC13.62□□□□□ -0.23
SRP9P49458 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC13.62□□□□□ -0.23
SRP9P49458 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SRP9P49458 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SRP9P49458 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC13.62□□□□□ -0.23
SRP9P49458 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
SRP9P49458 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC13.62□□□□□ -0.23
SRP9P49458 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SRP9P49458 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
SRP9P49458 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC13.62□□□□□ -0.23
SRP9P49458 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
SRP9P49458 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
SRP9P49458 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC13.62□□□□□ -0.23
SRP9P49458 VMA21-202ENST00000370361 693 ntTSL 5 BASIC13.62□□□□□ -0.23
SRP9P49458 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
SRP9P49458 MIR943-201ENST00000401286 94 ntBASIC13.62□□□□□ -0.23
SRP9P49458 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
SRP9P49458 ELP6-209ENST00000446787 894 ntTSL 3 BASIC13.62□□□□□ -0.23
SRP9P49458 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SRP9P49458 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC13.62□□□□□ -0.23
SRP9P49458 RFPL4AP1-201ENST00000530883 850 ntBASIC13.62□□□□□ -0.23
SRP9P49458 BANF1P1-201ENST00000553684 263 ntBASIC13.62□□□□□ -0.23
SRP9P49458 AL079307.3-201ENST00000556114 283 ntBASIC13.62□□□□□ -0.23
SRP9P49458 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC13.62□□□□□ -0.23
SRP9P49458 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC13.62□□□□□ -0.23
SRP9P49458 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC13.62□□□□□ -0.23
SRP9P49458 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC13.62□□□□□ -0.23
SRP9P49458 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
SRP9P49458 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
SRP9P49458 ZBTB45P2-201ENST00000452245 1531 ntBASIC13.62□□□□□ -0.23
SRP9P49458 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC13.62□□□□□ -0.23
SRP9P49458 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
SRP9P49458 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC13.62□□□□□ -0.23
SRP9P49458 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
SRP9P49458 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
SRP9P49458 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SRP9P49458 BEND3P1-201ENST00000421591 1944 ntBASIC13.62□□□□□ -0.23
SRP9P49458 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SRP9P49458 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SRP9P49458 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SRP9P49458 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SRP9P49458 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
SRP9P49458 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SRP9P49458 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
SRP9P49458 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
SRP9P49458 AL136982.4-201ENST00000437689 1740 ntBASIC13.61□□□□□ -0.23
SRP9P49458 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC13.61□□□□□ -0.23
SRP9P49458 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
SRP9P49458 CICP17-201ENST00000418553 2377 ntBASIC13.61□□□□□ -0.23
SRP9P49458 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SRP9P49458 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SRP9P49458 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC13.61□□□□□ -0.23
SRP9P49458 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC13.61□□□□□ -0.23
SRP9P49458 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC13.61□□□□□ -0.23
SRP9P49458 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC13.61□□□□□ -0.23
SRP9P49458 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SRP9P49458 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 65.3 ms