Protein–RNA interactions for Protein: P49450

CENPA, Histone H3-like centromeric protein A, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPAP49450 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
CENPAP49450 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
CENPAP49450 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CENPAP49450 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CENPAP49450 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC13.95□□□□□ -0.18
CENPAP49450 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
CENPAP49450 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC13.95□□□□□ -0.18
CENPAP49450 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CENPAP49450 C20orf203-202ENST00000608990 5076 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CENPAP49450 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
CENPAP49450 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CENPAP49450 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CENPAP49450 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CENPAP49450 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
CENPAP49450 BRWD1-201ENST00000333229 10141 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CENPAP49450 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC13.94□□□□□ -0.18
CENPAP49450 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CENPAP49450 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC13.94□□□□□ -0.18
CENPAP49450 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CENPAP49450 LAMB1-201ENST00000222399 5725 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CENPAP49450 INTS4P1-203ENST00000641008 3683 ntBASIC13.94□□□□□ -0.18
CENPAP49450 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC13.94□□□□□ -0.18
CENPAP49450 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CENPAP49450 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CENPAP49450 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
CENPAP49450 GET4-202ENST00000407192 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
CENPAP49450 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC13.94□□□□□ -0.18
CENPAP49450 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CENPAP49450 NLRP13-201ENST00000342929 3132 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
CENPAP49450 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CENPAP49450 CHD1-212ENST00000614616 8095 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
CENPAP49450 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CENPAP49450 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CENPAP49450 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
CENPAP49450 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC13.94□□□□□ -0.18
CENPAP49450 CNN2P11-201ENST00000429351 262 ntBASIC13.94□□□□□ -0.18
CENPAP49450 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC13.94□□□□□ -0.18
CENPAP49450 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC13.94□□□□□ -0.18
CENPAP49450 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC13.94□□□□□ -0.18
CENPAP49450 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC13.94□□□□□ -0.18
CENPAP49450 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC13.94□□□□□ -0.18
CENPAP49450 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CENPAP49450 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC13.94□□□□□ -0.18
CENPAP49450 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CENPAP49450 PRR29-209ENST00000582540 967 ntTSL 2 BASIC13.94□□□□□ -0.18
CENPAP49450 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC13.94□□□□□ -0.18
CENPAP49450 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC13.94□□□□□ -0.18
CENPAP49450 CETN4P-206ENST00000642099 2168 ntBASIC13.94□□□□□ -0.18
CENPAP49450 ELAVL1-201ENST00000407627 6015 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CENPAP49450 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CENPAP49450 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CENPAP49450 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CENPAP49450 BAG2-201ENST00000370693 6651 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CENPAP49450 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CENPAP49450 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
CENPAP49450 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CENPAP49450 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CENPAP49450 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CENPAP49450 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC13.94□□□□□ -0.18
CENPAP49450 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC13.94□□□□□ -0.18
CENPAP49450 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CENPAP49450 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
CENPAP49450 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CENPAP49450 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC13.94□□□□□ -0.18
CENPAP49450 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CENPAP49450 AGAP7P-201ENST00000582299 2062 ntBASIC13.94□□□□□ -0.18
CENPAP49450 AGAP14-201ENST00000624701 2060 ntBASIC13.94□□□□□ -0.18
CENPAP49450 NR3C2-209ENST00000625323 5909 ntTSL 5 BASIC13.94□□□□□ -0.18
CENPAP49450 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CENPAP49450 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
CENPAP49450 STRCP1-201ENST00000509801 5328 ntBASIC13.94□□□□□ -0.18
CENPAP49450 OSBPL1A-201ENST00000319481 4195 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CENPAP49450 MOB3C-203ENST00000371940 5725 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CENPAP49450 GBF1-201ENST00000369983 6403 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CENPAP49450 DENND3-202ENST00000424248 4740 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CENPAP49450 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CENPAP49450 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CENPAP49450 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
CENPAP49450 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
CENPAP49450 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC13.93□□□□□ -0.18
CENPAP49450 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
CENPAP49450 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
CENPAP49450 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CENPAP49450 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
CENPAP49450 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
CENPAP49450 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
CENPAP49450 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC13.93□□□□□ -0.18
CENPAP49450 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CENPAP49450 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC13.93□□□□□ -0.18
CENPAP49450 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC13.93□□□□□ -0.18
CENPAP49450 GSN-203ENST00000373808 2664 ntTSL 2 BASIC13.93□□□□□ -0.18
CENPAP49450 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC13.93□□□□□ -0.18
CENPAP49450 AL359183.1-201ENST00000623796 2132 ntBASIC13.93□□□□□ -0.18
CENPAP49450 MBTD1-204ENST00000586178 5382 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
CENPAP49450 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC13.93□□□□□ -0.18
CENPAP49450 AC079781.5-202ENST00000641784 3743 ntBASIC13.93□□□□□ -0.18
CENPAP49450 PRR12-201ENST00000418929 6955 ntAPPRIS P2 TSL 5 BASIC13.93□□□□□ -0.18
CENPAP49450 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC13.93□□□□□ -0.18
CENPAP49450 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
CENPAP49450 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 53.3 ms