Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
MTHFRP42898 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
MTHFRP42898 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
MTHFRP42898 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
MTHFRP42898 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
MTHFRP42898 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
MTHFRP42898 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
MTHFRP42898 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
MTHFRP42898 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
MTHFRP42898 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
MTHFRP42898 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC15.92■□□□□ 0.14
MTHFRP42898 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC15.92■□□□□ 0.14
MTHFRP42898 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC15.92■□□□□ 0.14
MTHFRP42898 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC15.92■□□□□ 0.14
MTHFRP42898 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
MTHFRP42898 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
MTHFRP42898 MTHFR-217ENST00000641820 1569 ntBASIC15.92■□□□□ 0.14
MTHFRP42898 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC15.92■□□□□ 0.14
MTHFRP42898 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC15.92■□□□□ 0.14
MTHFRP42898 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC15.92■□□□□ 0.14
MTHFRP42898 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
MTHFRP42898 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
MTHFRP42898 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
MTHFRP42898 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
MTHFRP42898 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC15.92■□□□□ 0.14
MTHFRP42898 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
MTHFRP42898 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
MTHFRP42898 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC15.92■□□□□ 0.14
MTHFRP42898 DPM3-202ENST00000368399 517 ntBASIC15.92■□□□□ 0.14
MTHFRP42898 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
MTHFRP42898 AL591684.1-201ENST00000434533 234 ntTSL 5 BASIC15.92■□□□□ 0.14
MTHFRP42898 EIF3FP3-201ENST00000434851 1086 ntBASIC15.92■□□□□ 0.14
MTHFRP42898 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC15.92■□□□□ 0.14
MTHFRP42898 AL136982.2-201ENST00000451760 234 ntTSL 5 BASIC15.92■□□□□ 0.14
MTHFRP42898 RAMP3-202ENST00000481345 559 ntAPPRIS P2 TSL 4 BASIC15.92■□□□□ 0.14
MTHFRP42898 AC091390.4-201ENST00000484974 491 ntTSL 3 BASIC15.92■□□□□ 0.14
MTHFRP42898 NUP210P1-202ENST00000504322 710 ntBASIC15.92■□□□□ 0.14
MTHFRP42898 MBP-227ENST00000526111 581 ntTSL 4 BASIC15.92■□□□□ 0.14
MTHFRP42898 PSORS1C1-206ENST00000547221 655 ntAPPRIS ALT2 TSL 3 BASIC15.92■□□□□ 0.14
MTHFRP42898 AL161670.2-201ENST00000557650 1227 ntBASIC15.92■□□□□ 0.14
MTHFRP42898 AC013355.1-201ENST00000562625 723 ntBASIC15.92■□□□□ 0.14
MTHFRP42898 SYT17-208ENST00000568433 812 ntTSL 3 BASIC15.92■□□□□ 0.14
MTHFRP42898 RN7SL574P-201ENST00000581512 297 ntBASIC15.92■□□□□ 0.14
MTHFRP42898 AC090386.1-202ENST00000586610 469 ntTSL 3 BASIC15.92■□□□□ 0.14
MTHFRP42898 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC15.92■□□□□ 0.14
MTHFRP42898 SRD5A3-AS1-211ENST00000599135 737 ntTSL 5 BASIC15.92■□□□□ 0.14
MTHFRP42898 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC15.92■□□□□ 0.14
MTHFRP42898 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
MTHFRP42898 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
MTHFRP42898 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
MTHFRP42898 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC15.92■□□□□ 0.14
MTHFRP42898 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC15.92■□□□□ 0.14
MTHFRP42898 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
MTHFRP42898 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
MTHFRP42898 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC15.92■□□□□ 0.14
MTHFRP42898 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC15.92■□□□□ 0.14
MTHFRP42898 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
MTHFRP42898 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC15.92■□□□□ 0.14
MTHFRP42898 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC15.92■□□□□ 0.14
MTHFRP42898 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
MTHFRP42898 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
MTHFRP42898 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
MTHFRP42898 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
MTHFRP42898 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
MTHFRP42898 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
MTHFRP42898 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC15.91■□□□□ 0.14
MTHFRP42898 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
MTHFRP42898 MBP-202ENST00000355994 2772 ntTSL 5 BASIC15.91■□□□□ 0.14
MTHFRP42898 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
MTHFRP42898 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
MTHFRP42898 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
MTHFRP42898 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
MTHFRP42898 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
MTHFRP42898 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
MTHFRP42898 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
MTHFRP42898 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
MTHFRP42898 AC008443.1-201ENST00000511331 1000 ntTSL 3 BASIC15.91■□□□□ 0.14
MTHFRP42898 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC15.91■□□□□ 0.14
MTHFRP42898 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC15.91■□□□□ 0.14
MTHFRP42898 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC15.91■□□□□ 0.14
MTHFRP42898 AC106820.3-201ENST00000561653 397 ntBASIC15.91■□□□□ 0.14
MTHFRP42898 AC026740.1-201ENST00000607068 791 ntBASIC15.91■□□□□ 0.14
MTHFRP42898 AC022748.3-201ENST00000621828 275 ntBASIC15.91■□□□□ 0.14
MTHFRP42898 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC15.91■□□□□ 0.14
MTHFRP42898 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
MTHFRP42898 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
MTHFRP42898 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
MTHFRP42898 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC15.91■□□□□ 0.14
MTHFRP42898 AC068418.2-201ENST00000577309 3703 ntBASIC15.91■□□□□ 0.14
MTHFRP42898 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC15.91■□□□□ 0.14
MTHFRP42898 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
MTHFRP42898 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC15.91■□□□□ 0.14
MTHFRP42898 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC15.91■□□□□ 0.14
MTHFRP42898 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
MTHFRP42898 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
MTHFRP42898 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
MTHFRP42898 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC15.91■□□□□ 0.14
MTHFRP42898 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
MTHFRP42898 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
MTHFRP42898 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 55.4 ms