Protein–RNA interactions for Protein: P20338

RAB4A, Ras-related protein Rab-4A, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4AP20338 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC11.79□□□□□ -0.52
RAB4AP20338 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC11.79□□□□□ -0.52
RAB4AP20338 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC11.79□□□□□ -0.52
RAB4AP20338 GDAP1L1-206ENST00000537864 2855 ntTSL 2 BASIC11.79□□□□□ -0.52
RAB4AP20338 SPATS2-223ENST00000553127 3320 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
RAB4AP20338 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
RAB4AP20338 KIFC3-202ENST00000421376 3128 ntTSL 2 BASIC11.79□□□□□ -0.52
RAB4AP20338 STK32B-201ENST00000282908 3582 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
RAB4AP20338 RRAGD-201ENST00000359203 4042 ntTSL 2 BASIC11.79□□□□□ -0.52
RAB4AP20338 DNAJB8-201ENST00000319153 2465 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
RAB4AP20338 SLC9A3P2-201ENST00000447821 2021 ntBASIC11.79□□□□□ -0.52
RAB4AP20338 ADAMTSL2-201ENST00000354484 4068 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
RAB4AP20338 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
RAB4AP20338 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC11.79□□□□□ -0.52
RAB4AP20338 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
RAB4AP20338 DYSF-202ENST00000394120 6543 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
RAB4AP20338 SCARB2-227ENST00000640957 3255 ntAPPRIS ALT1 TSL 5 BASIC11.78□□□□□ -0.52
RAB4AP20338 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
RAB4AP20338 SCN8A-209ENST00000627620 5943 ntAPPRIS ALT1 TSL 5 BASIC11.78□□□□□ -0.52
RAB4AP20338 FARP1-201ENST00000319562 10262 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
RAB4AP20338 AC011477.6-201ENST00000604980 1927 ntBASIC11.78□□□□□ -0.52
RAB4AP20338 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC11.78□□□□□ -0.52
RAB4AP20338 CALD1-205ENST00000422748 2665 ntTSL 2 BASIC11.78□□□□□ -0.52
RAB4AP20338 KIRREL2-203ENST00000360202 2942 ntAPPRIS P4 TSL 1 (best) BASIC11.78□□□□□ -0.52
RAB4AP20338 BCORL1-205ENST00000540052 7127 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
RAB4AP20338 F2RL3-201ENST00000248076 3473 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
RAB4AP20338 MIR9-3HG-201ENST00000536780 4778 ntTSL 3 BASIC11.78□□□□□ -0.52
RAB4AP20338 GRIN1-204ENST00000371553 3751 ntAPPRIS P4 TSL 1 (best) BASIC11.78□□□□□ -0.52
RAB4AP20338 LINC00863-201ENST00000439559 3287 ntTSL 5 BASIC11.78□□□□□ -0.52
RAB4AP20338 GPR4-201ENST00000323040 3048 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
RAB4AP20338 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
RAB4AP20338 FZD6-206ENST00000523739 2774 ntTSL 2 BASIC11.78□□□□□ -0.52
RAB4AP20338 TRPV1-209ENST00000576351 2525 ntTSL 5 BASIC11.78□□□□□ -0.52
RAB4AP20338 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
RAB4AP20338 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC11.78□□□□□ -0.52
RAB4AP20338 GIPC3-201ENST00000322315 4335 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
RAB4AP20338 DNMT3B-202ENST00000328111 4336 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
RAB4AP20338 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
RAB4AP20338 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
RAB4AP20338 AC005521.1-201ENST00000393351 872 ntBASIC11.78□□□□□ -0.52
RAB4AP20338 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
RAB4AP20338 DAP-202ENST00000432074 1048 ntTSL 2 BASIC11.78□□□□□ -0.52
RAB4AP20338 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC11.78□□□□□ -0.52
RAB4AP20338 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC11.78□□□□□ -0.52
RAB4AP20338 THAP5-204ENST00000438865 868 ntTSL 2 BASIC11.78□□□□□ -0.52
RAB4AP20338 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC11.78□□□□□ -0.52
RAB4AP20338 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC11.78□□□□□ -0.52
RAB4AP20338 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC11.78□□□□□ -0.52
RAB4AP20338 AL136038.3-201ENST00000561909 1096 ntBASIC11.78□□□□□ -0.52
RAB4AP20338 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC11.78□□□□□ -0.52
RAB4AP20338 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC11.78□□□□□ -0.52
RAB4AP20338 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC11.78□□□□□ -0.52
RAB4AP20338 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
RAB4AP20338 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC11.78□□□□□ -0.52
RAB4AP20338 RBM15-202ENST00000487146 3316 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
RAB4AP20338 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC11.78□□□□□ -0.52
RAB4AP20338 RTL5-202ENST00000609883 4105 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
RAB4AP20338 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
RAB4AP20338 TLK1-202ENST00000360843 5726 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
RAB4AP20338 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC11.78□□□□□ -0.52
RAB4AP20338 MX1-202ENST00000398598 2850 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
RAB4AP20338 USP22-206ENST00000537526 4976 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
RAB4AP20338 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC11.78□□□□□ -0.52
RAB4AP20338 AC012349.1-201ENST00000518662 2643 ntTSL 2 BASIC11.78□□□□□ -0.52
RAB4AP20338 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC11.78□□□□□ -0.52
RAB4AP20338 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC11.78□□□□□ -0.52
RAB4AP20338 TGM2-201ENST00000361475 5070 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
RAB4AP20338 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
RAB4AP20338 TSPEAR-AS2-202ENST00000354333 2422 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
RAB4AP20338 MTMR3-202ENST00000333027 8906 ntTSL 5 BASIC11.78□□□□□ -0.52
RAB4AP20338 DPP3-209ENST00000531863 2974 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
RAB4AP20338 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
RAB4AP20338 FAM109A-201ENST00000361483 3256 ntAPPRIS ALT2 TSL 3 BASIC11.78□□□□□ -0.52
RAB4AP20338 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC11.78□□□□□ -0.52
RAB4AP20338 ARL13B-210ENST00000535334 3906 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
RAB4AP20338 INTS4P1-203ENST00000641008 3683 ntBASIC11.78□□□□□ -0.52
RAB4AP20338 CCDC117-201ENST00000249064 3985 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
RAB4AP20338 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC11.77□□□□□ -0.52
RAB4AP20338 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
RAB4AP20338 RGS8-204ENST00000483095 1432 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.52
RAB4AP20338 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.52
RAB4AP20338 PCDH8-201ENST00000338862 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC11.77□□□□□ -0.52
RAB4AP20338 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC11.77□□□□□ -0.52
RAB4AP20338 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.52
RAB4AP20338 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC11.77□□□□□ -0.52
RAB4AP20338 AP5Z1-201ENST00000348624 2901 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.52
RAB4AP20338 POU2F2-204ENST00000526816 3218 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
RAB4AP20338 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
RAB4AP20338 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC11.77□□□□□ -0.52
RAB4AP20338 KIF21B-202ENST00000360529 5389 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
RAB4AP20338 PTCH1-207ENST00000429896 6563 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
RAB4AP20338 PLB1-201ENST00000327757 5107 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.52
RAB4AP20338 MYBBP1A-201ENST00000254718 4807 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.52
RAB4AP20338 CTR9-201ENST00000361367 4586 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
RAB4AP20338 STARD13-202ENST00000336934 5917 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
RAB4AP20338 ZNF331-201ENST00000253144 5042 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
RAB4AP20338 NFATC1-204ENST00000397790 3453 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
RAB4AP20338 NTSR1-201ENST00000370501 4132 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
RAB4AP20338 AC007663.2-201ENST00000506039 2228 ntTSL 2 BASIC11.77□□□□□ -0.53
RAB4AP20338 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms