Protein–RNA interactions for Protein: P13994

CCDC130, Coiled-coil domain-containing protein 130, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130P13994 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC16.15■□□□□ 0.18
CCDC130P13994 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC16.15■□□□□ 0.18
CCDC130P13994 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC16.15■□□□□ 0.18
CCDC130P13994 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC16.15■□□□□ 0.18
CCDC130P13994 IGHV3-71-201ENST00000523324 359 ntBASIC16.15■□□□□ 0.18
CCDC130P13994 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC16.15■□□□□ 0.18
CCDC130P13994 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC16.15■□□□□ 0.18
CCDC130P13994 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC16.15■□□□□ 0.18
CCDC130P13994 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC16.15■□□□□ 0.18
CCDC130P13994 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
CCDC130P13994 NID2-208ENST00000617139 3827 ntTSL 5 BASIC16.15■□□□□ 0.18
CCDC130P13994 SERF2-217ENST00000630046 862 ntTSL 5 BASIC16.15■□□□□ 0.18
CCDC130P13994 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC16.15■□□□□ 0.18
CCDC130P13994 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC16.15■□□□□ 0.18
CCDC130P13994 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CCDC130P13994 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CCDC130P13994 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC16.15■□□□□ 0.18
CCDC130P13994 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
CCDC130P13994 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
CCDC130P13994 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
CCDC130P13994 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CCDC130P13994 DBET-201ENST00000630918 3363 ntBASIC16.15■□□□□ 0.18
CCDC130P13994 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
CCDC130P13994 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC16.15■□□□□ 0.18
CCDC130P13994 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CCDC130P13994 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
CCDC130P13994 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CCDC130P13994 AL138709.1-201ENST00000614840 1693 ntBASIC16.14■□□□□ 0.18
CCDC130P13994 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CCDC130P13994 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CCDC130P13994 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC16.14■□□□□ 0.17
CCDC130P13994 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
CCDC130P13994 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC16.14■□□□□ 0.17
CCDC130P13994 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
CCDC130P13994 AC023157.3-201ENST00000619086 2088 ntBASIC16.14■□□□□ 0.17
CCDC130P13994 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
CCDC130P13994 MECR-202ENST00000373791 2416 ntTSL 2 BASIC16.14■□□□□ 0.17
CCDC130P13994 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CCDC130P13994 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
CCDC130P13994 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
CCDC130P13994 ZBTB12BP-201ENST00000314232 1122 ntBASIC16.14■□□□□ 0.17
CCDC130P13994 LBX2-201ENST00000341396 886 ntTSL 3 BASIC16.14■□□□□ 0.17
CCDC130P13994 AC007551.1-201ENST00000457394 519 ntBASIC16.14■□□□□ 0.17
CCDC130P13994 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC16.14■□□□□ 0.17
CCDC130P13994 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC16.14■□□□□ 0.17
CCDC130P13994 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC16.14■□□□□ 0.17
CCDC130P13994 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
CCDC130P13994 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CCDC130P13994 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC16.14■□□□□ 0.17
CCDC130P13994 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC16.14■□□□□ 0.17
CCDC130P13994 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC16.14■□□□□ 0.17
CCDC130P13994 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
CCDC130P13994 AL137783.1-201ENST00000623494 1896 ntBASIC16.14■□□□□ 0.17
CCDC130P13994 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CCDC130P13994 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CCDC130P13994 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
CCDC130P13994 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
CCDC130P13994 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC16.13■□□□□ 0.17
CCDC130P13994 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC16.13■□□□□ 0.17
CCDC130P13994 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CCDC130P13994 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CCDC130P13994 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CCDC130P13994 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CCDC130P13994 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC16.13■□□□□ 0.17
CCDC130P13994 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
CCDC130P13994 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CCDC130P13994 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CCDC130P13994 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CCDC130P13994 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC16.13■□□□□ 0.17
CCDC130P13994 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CCDC130P13994 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
CCDC130P13994 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CCDC130P13994 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC16.13■□□□□ 0.17
CCDC130P13994 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
CCDC130P13994 FLJ16779-201ENST00000612722 7638 ntBASIC16.13■□□□□ 0.17
CCDC130P13994 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC16.13■□□□□ 0.17
CCDC130P13994 LSM5-207ENST00000410044 687 ntTSL 3 BASIC16.13■□□□□ 0.17
CCDC130P13994 USB1-202ENST00000423271 1217 ntTSL 2 BASIC16.13■□□□□ 0.17
CCDC130P13994 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC16.13■□□□□ 0.17
CCDC130P13994 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CCDC130P13994 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC16.13■□□□□ 0.17
CCDC130P13994 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC16.13■□□□□ 0.17
CCDC130P13994 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC16.13■□□□□ 0.17
CCDC130P13994 APRT-204ENST00000563655 709 ntTSL 5 BASIC16.13■□□□□ 0.17
CCDC130P13994 AC025279.2-201ENST00000569730 653 ntBASIC16.13■□□□□ 0.17
CCDC130P13994 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC16.13■□□□□ 0.17
CCDC130P13994 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC16.13■□□□□ 0.17
CCDC130P13994 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CCDC130P13994 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
CCDC130P13994 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC16.13■□□□□ 0.17
CCDC130P13994 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC16.13■□□□□ 0.17
CCDC130P13994 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC16.13■□□□□ 0.17
CCDC130P13994 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CCDC130P13994 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CCDC130P13994 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC16.13■□□□□ 0.17
CCDC130P13994 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CCDC130P13994 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CCDC130P13994 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CCDC130P13994 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CCDC130P13994 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 57.1 ms