Protein–RNA interactions for Protein: P13637

ATP1A3, Sodium/potassium-transporting ATPase subunit alpha-3, humanhuman

Predictions only

Length 1,013 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP1A3P13637 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC16.84■□□□□ 0.29
ATP1A3P13637 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC16.84■□□□□ 0.29
ATP1A3P13637 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC16.84■□□□□ 0.29
ATP1A3P13637 MYO15B-237ENST00000642007 4893 ntBASIC16.84■□□□□ 0.29
ATP1A3P13637 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
ATP1A3P13637 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ATP1A3P13637 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
ATP1A3P13637 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
ATP1A3P13637 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
ATP1A3P13637 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.29
ATP1A3P13637 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.29
ATP1A3P13637 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
ATP1A3P13637 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.29
ATP1A3P13637 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.29
ATP1A3P13637 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.29
ATP1A3P13637 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC16.83■□□□□ 0.29
ATP1A3P13637 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC16.83■□□□□ 0.29
ATP1A3P13637 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
ATP1A3P13637 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ATP1A3P13637 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ATP1A3P13637 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ATP1A3P13637 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
ATP1A3P13637 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
ATP1A3P13637 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ATP1A3P13637 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ATP1A3P13637 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ATP1A3P13637 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
ATP1A3P13637 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ATP1A3P13637 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC16.83■□□□□ 0.28
ATP1A3P13637 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ATP1A3P13637 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
ATP1A3P13637 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC16.83■□□□□ 0.28
ATP1A3P13637 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
ATP1A3P13637 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
ATP1A3P13637 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
ATP1A3P13637 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC16.83■□□□□ 0.28
ATP1A3P13637 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ATP1A3P13637 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC16.83■□□□□ 0.28
ATP1A3P13637 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
ATP1A3P13637 MIR3687-2-201ENST00000577708 61 ntBASIC16.83■□□□□ 0.28
ATP1A3P13637 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC16.83■□□□□ 0.28
ATP1A3P13637 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC16.83■□□□□ 0.28
ATP1A3P13637 AC074044.1-201ENST00000609673 707 ntBASIC16.83■□□□□ 0.28
ATP1A3P13637 TEX28P1-201ENST00000613479 1221 ntBASIC16.83■□□□□ 0.28
ATP1A3P13637 MIR3687-1-201ENST00000614492 61 ntBASIC16.83■□□□□ 0.28
ATP1A3P13637 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC16.83■□□□□ 0.28
ATP1A3P13637 TEX28P2-201ENST00000617764 1221 ntBASIC16.83■□□□□ 0.28
ATP1A3P13637 SPDYE12P-201ENST00000618416 771 ntBASIC16.83■□□□□ 0.28
ATP1A3P13637 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
ATP1A3P13637 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
ATP1A3P13637 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ATP1A3P13637 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
ATP1A3P13637 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
ATP1A3P13637 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ATP1A3P13637 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
ATP1A3P13637 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ATP1A3P13637 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ATP1A3P13637 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ATP1A3P13637 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
ATP1A3P13637 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
ATP1A3P13637 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC16.82■□□□□ 0.28
ATP1A3P13637 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC16.82■□□□□ 0.28
ATP1A3P13637 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ATP1A3P13637 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ATP1A3P13637 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
ATP1A3P13637 SPDYE7P-202ENST00000420373 878 ntBASIC16.82■□□□□ 0.28
ATP1A3P13637 BX842568.4-201ENST00000421222 227 ntBASIC16.82■□□□□ 0.28
ATP1A3P13637 RPP21-221ENST00000428040 594 ntTSL 2 BASIC16.82■□□□□ 0.28
ATP1A3P13637 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC16.82■□□□□ 0.28
ATP1A3P13637 AC112482.1-201ENST00000492080 688 ntBASIC16.82■□□□□ 0.28
ATP1A3P13637 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC16.82■□□□□ 0.28
ATP1A3P13637 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC16.82■□□□□ 0.28
ATP1A3P13637 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC16.82■□□□□ 0.28
ATP1A3P13637 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
ATP1A3P13637 AC010327.4-202ENST00000591484 748 ntBASIC16.82■□□□□ 0.28
ATP1A3P13637 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC16.82■□□□□ 0.28
ATP1A3P13637 COQ4-205ENST00000609948 956 ntTSL 2 BASIC16.82■□□□□ 0.28
ATP1A3P13637 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC16.82■□□□□ 0.28
ATP1A3P13637 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
ATP1A3P13637 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
ATP1A3P13637 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
ATP1A3P13637 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
ATP1A3P13637 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ATP1A3P13637 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
ATP1A3P13637 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ATP1A3P13637 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC16.82■□□□□ 0.28
ATP1A3P13637 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
ATP1A3P13637 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
ATP1A3P13637 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC16.82■□□□□ 0.28
ATP1A3P13637 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC16.82■□□□□ 0.28
ATP1A3P13637 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
ATP1A3P13637 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
ATP1A3P13637 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ATP1A3P13637 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ATP1A3P13637 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC16.81■□□□□ 0.28
ATP1A3P13637 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
ATP1A3P13637 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
ATP1A3P13637 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
ATP1A3P13637 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC16.81■□□□□ 0.28
ATP1A3P13637 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms