Protein–RNA interactions for Protein: P07988

SFTPB, Pulmonary surfactant-associated protein B, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPBP07988 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC13.36□□□□□ -0.27
SFTPBP07988 HIST3H2BA-201ENST00000436555 524 ntBASIC13.36□□□□□ -0.27
SFTPBP07988 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC13.36□□□□□ -0.27
SFTPBP07988 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC13.36□□□□□ -0.27
SFTPBP07988 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
SFTPBP07988 INGX-202ENST00000489074 768 ntBASIC13.36□□□□□ -0.27
SFTPBP07988 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
SFTPBP07988 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC13.36□□□□□ -0.27
SFTPBP07988 RNA5SP421-201ENST00000516864 134 ntBASIC13.36□□□□□ -0.27
SFTPBP07988 AQP6-203ENST00000551733 849 ntTSL 3 BASIC13.36□□□□□ -0.27
SFTPBP07988 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC13.36□□□□□ -0.27
SFTPBP07988 LITAF-210ENST00000571976 548 ntTSL 2 BASIC13.36□□□□□ -0.27
SFTPBP07988 LITAF-214ENST00000574703 486 ntTSL 2 BASIC13.36□□□□□ -0.27
SFTPBP07988 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SFTPBP07988 AC092364.2-202ENST00000597012 1073 ntBASIC13.36□□□□□ -0.27
SFTPBP07988 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC13.36□□□□□ -0.27
SFTPBP07988 AL133215.2-201ENST00000609242 977 ntBASIC13.36□□□□□ -0.27
SFTPBP07988 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SFTPBP07988 GRAMD4-202ENST00000406902 4484 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SFTPBP07988 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC13.36□□□□□ -0.27
SFTPBP07988 PCDHB16-201ENST00000609684 5001 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
SFTPBP07988 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC13.36□□□□□ -0.27
SFTPBP07988 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
SFTPBP07988 STAM2-201ENST00000263904 5701 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SFTPBP07988 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SFTPBP07988 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC13.36□□□□□ -0.27
SFTPBP07988 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SFTPBP07988 JAKMIP3-201ENST00000298622 6626 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
SFTPBP07988 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SFTPBP07988 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
SFTPBP07988 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
SFTPBP07988 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SFTPBP07988 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
SFTPBP07988 IKZF1-218ENST00000615491 5637 ntTSL 5 BASIC13.36□□□□□ -0.27
SFTPBP07988 CAND2-201ENST00000295989 4429 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
SFTPBP07988 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
SFTPBP07988 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SFTPBP07988 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
SFTPBP07988 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
SFTPBP07988 ANK1-205ENST00000347528 8237 ntAPPRIS P4 TSL 1 (best) BASIC13.35□□□□□ -0.27
SFTPBP07988 PDXK-210ENST00000468090 7297 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
SFTPBP07988 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
SFTPBP07988 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC13.35□□□□□ -0.27
SFTPBP07988 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SFTPBP07988 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC13.35□□□□□ -0.27
SFTPBP07988 MROH2A-201ENST00000389758 5355 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
SFTPBP07988 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SFTPBP07988 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SFTPBP07988 ABCA2-201ENST00000265662 8154 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
SFTPBP07988 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC13.35□□□□□ -0.27
SFTPBP07988 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SFTPBP07988 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
SFTPBP07988 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SFTPBP07988 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SFTPBP07988 VMA21-202ENST00000370361 693 ntTSL 5 BASIC13.35□□□□□ -0.27
SFTPBP07988 SPDYE17-201ENST00000412399 783 ntBASIC13.35□□□□□ -0.27
SFTPBP07988 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC13.35□□□□□ -0.27
SFTPBP07988 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC13.35□□□□□ -0.27
SFTPBP07988 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC13.35□□□□□ -0.27
SFTPBP07988 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC13.35□□□□□ -0.27
SFTPBP07988 SATB1-217ENST00000493952 626 ntTSL 3 BASIC13.35□□□□□ -0.27
SFTPBP07988 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
SFTPBP07988 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC13.35□□□□□ -0.27
SFTPBP07988 AC027369.6-201ENST00000525520 931 ntBASIC13.35□□□□□ -0.27
SFTPBP07988 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
SFTPBP07988 NAA60-208ENST00000570819 833 ntTSL 2 BASIC13.35□□□□□ -0.27
SFTPBP07988 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC13.35□□□□□ -0.27
SFTPBP07988 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC13.35□□□□□ -0.27
SFTPBP07988 RN7SL828P-201ENST00000607615 303 ntBASIC13.35□□□□□ -0.27
SFTPBP07988 COQ4-205ENST00000609948 956 ntTSL 2 BASIC13.35□□□□□ -0.27
SFTPBP07988 SPDYE12P-201ENST00000618416 771 ntBASIC13.35□□□□□ -0.27
SFTPBP07988 AC073592.8-201ENST00000624126 511 ntBASIC13.35□□□□□ -0.27
SFTPBP07988 PHF14-201ENST00000403050 4276 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
SFTPBP07988 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC13.35□□□□□ -0.27
SFTPBP07988 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC13.35□□□□□ -0.27
SFTPBP07988 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
SFTPBP07988 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC13.35□□□□□ -0.27
SFTPBP07988 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC13.35□□□□□ -0.27
SFTPBP07988 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
SFTPBP07988 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SFTPBP07988 RALGAPA1-201ENST00000307138 7911 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SFTPBP07988 VTI1B-204ENST00000554659 5351 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SFTPBP07988 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SFTPBP07988 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC13.35□□□□□ -0.27
SFTPBP07988 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SFTPBP07988 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
SFTPBP07988 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC13.35□□□□□ -0.27
SFTPBP07988 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
SFTPBP07988 SLC25A29-208ENST00000554912 5169 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
SFTPBP07988 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC13.35□□□□□ -0.27
SFTPBP07988 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
SFTPBP07988 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC13.35□□□□□ -0.27
SFTPBP07988 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
SFTPBP07988 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
SFTPBP07988 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC13.34□□□□□ -0.27
SFTPBP07988 IMPDH1P4-201ENST00000445028 1534 ntBASIC13.34□□□□□ -0.27
SFTPBP07988 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC13.34□□□□□ -0.27
SFTPBP07988 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SFTPBP07988 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
SFTPBP07988 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 82 ms