Protein–RNA interactions for Protein: O43347

MSI1, RNA-binding protein Musashi homolog 1, humanhuman

Known RBP Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSI1O43347 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC15.83■□□□□ 0.12
MSI1O43347 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
MSI1O43347 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
MSI1O43347 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
MSI1O43347 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
MSI1O43347 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
MSI1O43347 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
MSI1O43347 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
MSI1O43347 DBET-201ENST00000630918 3363 ntBASIC15.83■□□□□ 0.12
MSI1O43347 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC15.82■□□□□ 0.12
MSI1O43347 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
MSI1O43347 AC055811.4-201ENST00000624039 1754 ntBASIC15.82■□□□□ 0.12
MSI1O43347 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
MSI1O43347 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
MSI1O43347 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC15.82■□□□□ 0.12
MSI1O43347 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
MSI1O43347 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
MSI1O43347 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
MSI1O43347 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
MSI1O43347 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
MSI1O43347 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
MSI1O43347 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
MSI1O43347 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
MSI1O43347 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
MSI1O43347 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
MSI1O43347 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
MSI1O43347 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
MSI1O43347 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC15.82■□□□□ 0.12
MSI1O43347 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC15.82■□□□□ 0.12
MSI1O43347 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
MSI1O43347 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
MSI1O43347 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
MSI1O43347 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
MSI1O43347 LSM5-207ENST00000410044 687 ntTSL 3 BASIC15.82■□□□□ 0.12
MSI1O43347 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
MSI1O43347 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC15.82■□□□□ 0.12
MSI1O43347 RPL8-205ENST00000527914 551 ntTSL 3 BASIC15.82■□□□□ 0.12
MSI1O43347 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC15.82■□□□□ 0.12
MSI1O43347 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC15.82■□□□□ 0.12
MSI1O43347 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC15.82■□□□□ 0.12
MSI1O43347 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC15.82■□□□□ 0.12
MSI1O43347 ECM1P1-201ENST00000604092 1279 ntBASIC15.82■□□□□ 0.12
MSI1O43347 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC15.82■□□□□ 0.12
MSI1O43347 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
MSI1O43347 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
MSI1O43347 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
MSI1O43347 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
MSI1O43347 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
MSI1O43347 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
MSI1O43347 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
MSI1O43347 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
MSI1O43347 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
MSI1O43347 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
MSI1O43347 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
MSI1O43347 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
MSI1O43347 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
MSI1O43347 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
MSI1O43347 NORAD-201ENST00000565493 5339 ntBASIC15.81■□□□□ 0.12
MSI1O43347 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
MSI1O43347 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
MSI1O43347 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
MSI1O43347 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
MSI1O43347 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
MSI1O43347 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
MSI1O43347 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
MSI1O43347 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC15.81■□□□□ 0.12
MSI1O43347 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
MSI1O43347 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
MSI1O43347 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
MSI1O43347 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC15.81■□□□□ 0.12
MSI1O43347 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC15.81■□□□□ 0.12
MSI1O43347 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
MSI1O43347 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
MSI1O43347 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC15.81■□□□□ 0.12
MSI1O43347 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC15.81■□□□□ 0.12
MSI1O43347 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
MSI1O43347 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC15.81■□□□□ 0.12
MSI1O43347 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC15.81■□□□□ 0.12
MSI1O43347 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
MSI1O43347 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
MSI1O43347 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC15.81■□□□□ 0.12
MSI1O43347 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC15.81■□□□□ 0.12
MSI1O43347 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
MSI1O43347 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
MSI1O43347 RPL7P3-201ENST00000441388 714 ntBASIC15.81■□□□□ 0.12
MSI1O43347 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC15.81■□□□□ 0.12
MSI1O43347 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
MSI1O43347 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC15.81■□□□□ 0.12
MSI1O43347 AC022616.1-201ENST00000518688 554 ntBASIC15.81■□□□□ 0.12
MSI1O43347 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC15.81■□□□□ 0.12
MSI1O43347 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC15.81■□□□□ 0.12
MSI1O43347 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC15.81■□□□□ 0.12
MSI1O43347 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC15.81■□□□□ 0.12
MSI1O43347 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC15.81■□□□□ 0.12
MSI1O43347 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
MSI1O43347 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC15.81■□□□□ 0.12
MSI1O43347 PFAS-212ENST00000625942 396 ntTSL 5 BASIC15.81■□□□□ 0.12
MSI1O43347 SERF2-217ENST00000630046 862 ntTSL 5 BASIC15.81■□□□□ 0.12
MSI1O43347 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
MSI1O43347 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 95.2 ms