Protein–RNA interactions for Protein: O00231

PSMD11, 26S proteasome non-ATPase regulatory subunit 11, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD11O00231 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
PSMD11O00231 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PSMD11O00231 TP73-213ENST00000604479 1623 ntTSL 5 BASIC15.29■□□□□ 0.04
PSMD11O00231 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PSMD11O00231 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
PSMD11O00231 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PSMD11O00231 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
PSMD11O00231 KRT8P14-201ENST00000414254 1442 ntBASIC15.29■□□□□ 0.04
PSMD11O00231 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
PSMD11O00231 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
PSMD11O00231 KRT8P35-201ENST00000483942 1338 ntBASIC15.29■□□□□ 0.04
PSMD11O00231 KLF2P2-201ENST00000416807 1039 ntBASIC15.29■□□□□ 0.04
PSMD11O00231 RPL28-203ENST00000428193 573 ntTSL 2 BASIC15.29■□□□□ 0.04
PSMD11O00231 RPL28-204ENST00000431533 590 ntTSL 2 BASIC15.29■□□□□ 0.04
PSMD11O00231 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC15.29■□□□□ 0.04
PSMD11O00231 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC15.29■□□□□ 0.04
PSMD11O00231 CFL1-212ENST00000531413 636 ntTSL 3 BASIC15.29■□□□□ 0.04
PSMD11O00231 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC15.29■□□□□ 0.04
PSMD11O00231 KRT17P8-201ENST00000540749 863 ntBASIC15.29■□□□□ 0.04
PSMD11O00231 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC15.29■□□□□ 0.04
PSMD11O00231 RPL28-207ENST00000558815 616 ntTSL 2 BASIC15.29■□□□□ 0.04
PSMD11O00231 ORC6-206ENST00000568364 888 ntTSL 5 BASIC15.29■□□□□ 0.04
PSMD11O00231 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC15.29■□□□□ 0.04
PSMD11O00231 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
PSMD11O00231 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PSMD11O00231 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
PSMD11O00231 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
PSMD11O00231 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PSMD11O00231 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PSMD11O00231 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PSMD11O00231 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PSMD11O00231 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PSMD11O00231 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PSMD11O00231 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PSMD11O00231 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
PSMD11O00231 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
PSMD11O00231 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PSMD11O00231 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
PSMD11O00231 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
PSMD11O00231 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
PSMD11O00231 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
PSMD11O00231 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
PSMD11O00231 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
PSMD11O00231 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
PSMD11O00231 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
PSMD11O00231 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC15.28■□□□□ 0.04
PSMD11O00231 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PSMD11O00231 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
PSMD11O00231 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC15.28■□□□□ 0.04
PSMD11O00231 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC15.28■□□□□ 0.04
PSMD11O00231 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC15.28■□□□□ 0.04
PSMD11O00231 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
PSMD11O00231 RNU1-114P-201ENST00000365297 166 ntBASIC15.28■□□□□ 0.04
PSMD11O00231 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC15.28■□□□□ 0.04
PSMD11O00231 AC079776.1-201ENST00000401540 1152 ntBASIC15.28■□□□□ 0.04
PSMD11O00231 HIST1H2BPS3-201ENST00000419683 341 ntBASIC15.28■□□□□ 0.04
PSMD11O00231 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
PSMD11O00231 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
PSMD11O00231 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC15.28■□□□□ 0.04
PSMD11O00231 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC15.28■□□□□ 0.04
PSMD11O00231 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC15.28■□□□□ 0.04
PSMD11O00231 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC15.28■□□□□ 0.04
PSMD11O00231 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
PSMD11O00231 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC15.28■□□□□ 0.04
PSMD11O00231 RAB43P1-201ENST00000561790 589 ntBASIC15.28■□□□□ 0.04
PSMD11O00231 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
PSMD11O00231 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
PSMD11O00231 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PSMD11O00231 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PSMD11O00231 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
PSMD11O00231 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PSMD11O00231 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC15.28■□□□□ 0.04
PSMD11O00231 AC136621.1-201ENST00000624017 2304 ntBASIC15.28■□□□□ 0.04
PSMD11O00231 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
PSMD11O00231 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PSMD11O00231 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PSMD11O00231 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
PSMD11O00231 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PSMD11O00231 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC15.28■□□□□ 0.04
PSMD11O00231 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
PSMD11O00231 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC15.28■□□□□ 0.04
PSMD11O00231 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
PSMD11O00231 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC15.28■□□□□ 0.04
PSMD11O00231 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PSMD11O00231 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC15.27■□□□□ 0.04
PSMD11O00231 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PSMD11O00231 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
PSMD11O00231 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PSMD11O00231 AC012508.2-201ENST00000567613 1472 ntBASIC15.27■□□□□ 0.04
PSMD11O00231 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PSMD11O00231 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
PSMD11O00231 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PSMD11O00231 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PSMD11O00231 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
PSMD11O00231 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PSMD11O00231 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
PSMD11O00231 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PSMD11O00231 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC15.27■□□□□ 0.04
PSMD11O00231 MSTO2P-201ENST00000314835 1709 ntBASIC15.27■□□□□ 0.04
PSMD11O00231 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC15.27■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 55.9 ms