Protein–RNA interactions for Protein: Q9Y366

IFT52, Intraflagellar transport protein 52 homolog, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT52Q9Y366 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
IFT52Q9Y366 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
IFT52Q9Y366 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
IFT52Q9Y366 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
IFT52Q9Y366 AC015922.1-201ENST00000421102 1152 ntBASIC14.39□□□□□ -0.11
IFT52Q9Y366 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC14.39□□□□□ -0.11
IFT52Q9Y366 PPP6R2P1-201ENST00000450880 1275 ntBASIC14.39□□□□□ -0.11
IFT52Q9Y366 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
IFT52Q9Y366 CALM1-205ENST00000553542 877 ntTSL 5 BASIC14.39□□□□□ -0.11
IFT52Q9Y366 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
IFT52Q9Y366 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC14.39□□□□□ -0.11
IFT52Q9Y366 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC14.39□□□□□ -0.11
IFT52Q9Y366 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
IFT52Q9Y366 AC027612.4-201ENST00000605371 583 ntBASIC14.39□□□□□ -0.11
IFT52Q9Y366 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC14.39□□□□□ -0.11
IFT52Q9Y366 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
IFT52Q9Y366 AMT-204ENST00000427987 1646 ntTSL 5 BASIC14.39□□□□□ -0.11
IFT52Q9Y366 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC14.39□□□□□ -0.11
IFT52Q9Y366 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
IFT52Q9Y366 MLX-202ENST00000346833 2334 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
IFT52Q9Y366 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
IFT52Q9Y366 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC14.39□□□□□ -0.11
IFT52Q9Y366 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
IFT52Q9Y366 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC14.39□□□□□ -0.11
IFT52Q9Y366 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
IFT52Q9Y366 CICP8-201ENST00000455800 2813 ntBASIC14.39□□□□□ -0.11
IFT52Q9Y366 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC14.39□□□□□ -0.11
IFT52Q9Y366 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
IFT52Q9Y366 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC14.39□□□□□ -0.11
IFT52Q9Y366 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
IFT52Q9Y366 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
IFT52Q9Y366 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
IFT52Q9Y366 CDK11B-203ENST00000341832 2998 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
IFT52Q9Y366 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
IFT52Q9Y366 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
IFT52Q9Y366 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
IFT52Q9Y366 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
IFT52Q9Y366 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
IFT52Q9Y366 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
IFT52Q9Y366 LRRC41-208ENST00000617760 2158 ntTSL 5 BASIC14.39□□□□□ -0.11
IFT52Q9Y366 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
IFT52Q9Y366 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
IFT52Q9Y366 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC14.38□□□□□ -0.11
IFT52Q9Y366 NTRK3-AS1-201ENST00000569588 2663 ntTSL 2 BASIC14.38□□□□□ -0.11
IFT52Q9Y366 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
IFT52Q9Y366 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
IFT52Q9Y366 USP28-214ENST00000545540 3431 ntTSL 2 BASIC14.38□□□□□ -0.11
IFT52Q9Y366 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC14.38□□□□□ -0.11
IFT52Q9Y366 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC14.38□□□□□ -0.11
IFT52Q9Y366 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC14.38□□□□□ -0.11
IFT52Q9Y366 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC14.38□□□□□ -0.11
IFT52Q9Y366 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
IFT52Q9Y366 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
IFT52Q9Y366 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
IFT52Q9Y366 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
IFT52Q9Y366 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
IFT52Q9Y366 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC14.38□□□□□ -0.11
IFT52Q9Y366 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
IFT52Q9Y366 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
IFT52Q9Y366 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
IFT52Q9Y366 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC14.38□□□□□ -0.11
IFT52Q9Y366 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC14.38□□□□□ -0.11
IFT52Q9Y366 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
IFT52Q9Y366 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
IFT52Q9Y366 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
IFT52Q9Y366 GHSR-202ENST00000427970 912 ntBASIC14.38□□□□□ -0.11
IFT52Q9Y366 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC14.38□□□□□ -0.11
IFT52Q9Y366 RN7SL618P-201ENST00000477850 296 ntBASIC14.38□□□□□ -0.11
IFT52Q9Y366 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
IFT52Q9Y366 VPS29-207ENST00000549970 818 ntTSL 3 BASIC14.38□□□□□ -0.11
IFT52Q9Y366 AC025678.2-201ENST00000562061 970 ntBASIC14.38□□□□□ -0.11
IFT52Q9Y366 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
IFT52Q9Y366 AL596442.2-201ENST00000610240 980 ntBASIC14.38□□□□□ -0.11
IFT52Q9Y366 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC14.38□□□□□ -0.11
IFT52Q9Y366 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC14.38□□□□□ -0.11
IFT52Q9Y366 AL645728.2-202ENST00000641679 227 ntBASIC14.38□□□□□ -0.11
IFT52Q9Y366 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
IFT52Q9Y366 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
IFT52Q9Y366 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC14.38□□□□□ -0.11
IFT52Q9Y366 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
IFT52Q9Y366 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC14.38□□□□□ -0.11
IFT52Q9Y366 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
IFT52Q9Y366 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC14.38□□□□□ -0.11
IFT52Q9Y366 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
IFT52Q9Y366 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
IFT52Q9Y366 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
IFT52Q9Y366 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC14.38□□□□□ -0.11
IFT52Q9Y366 WDR24-201ENST00000248142 2763 ntTSL 5 BASIC14.38□□□□□ -0.11
IFT52Q9Y366 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
IFT52Q9Y366 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
IFT52Q9Y366 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
IFT52Q9Y366 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
IFT52Q9Y366 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
IFT52Q9Y366 DUSP28-202ENST00000405954 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
IFT52Q9Y366 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC14.38□□□□□ -0.11
IFT52Q9Y366 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
IFT52Q9Y366 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
IFT52Q9Y366 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC14.37□□□□□ -0.11
IFT52Q9Y366 MFF-204ENST00000353339 2186 ntTSL 5 BASIC14.37□□□□□ -0.11
IFT52Q9Y366 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC14.37□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 52.7 ms