Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
RCL1Q9Y2P8 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC12.55□□□□□ -0.4
RCL1Q9Y2P8 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC12.55□□□□□ -0.4
RCL1Q9Y2P8 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
RCL1Q9Y2P8 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
RCL1Q9Y2P8 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
RCL1Q9Y2P8 ZNF395-201ENST00000344423 4808 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
RCL1Q9Y2P8 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
RCL1Q9Y2P8 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
RCL1Q9Y2P8 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC12.55□□□□□ -0.4
RCL1Q9Y2P8 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
RCL1Q9Y2P8 VTI1B-204ENST00000554659 5351 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
RCL1Q9Y2P8 FAM156A-221ENST00000622447 3757 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
RCL1Q9Y2P8 SF1-201ENST00000227503 2850 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
RCL1Q9Y2P8 DHTKD1-201ENST00000263035 5159 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
RCL1Q9Y2P8 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
RCL1Q9Y2P8 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
RCL1Q9Y2P8 MIR1224-201ENST00000408193 85 ntBASIC12.55□□□□□ -0.4
RCL1Q9Y2P8 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC12.55□□□□□ -0.4
RCL1Q9Y2P8 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC12.55□□□□□ -0.4
RCL1Q9Y2P8 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC12.55□□□□□ -0.4
RCL1Q9Y2P8 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC12.55□□□□□ -0.4
RCL1Q9Y2P8 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC12.55□□□□□ -0.4
RCL1Q9Y2P8 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC12.55□□□□□ -0.4
RCL1Q9Y2P8 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC12.55□□□□□ -0.4
RCL1Q9Y2P8 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC12.55□□□□□ -0.4
RCL1Q9Y2P8 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
RCL1Q9Y2P8 TBCB-205ENST00000585746 875 ntTSL 3 BASIC12.55□□□□□ -0.4
RCL1Q9Y2P8 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC12.55□□□□□ -0.4
RCL1Q9Y2P8 MED16-214ENST00000617672 554 ntTSL 5 BASIC12.55□□□□□ -0.4
RCL1Q9Y2P8 SERF2-217ENST00000630046 862 ntTSL 5 BASIC12.55□□□□□ -0.4
RCL1Q9Y2P8 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC12.55□□□□□ -0.4
RCL1Q9Y2P8 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
RCL1Q9Y2P8 TRPV6-201ENST00000359396 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
RCL1Q9Y2P8 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC12.55□□□□□ -0.4
RCL1Q9Y2P8 MED22-209ENST00000610888 3867 ntAPPRIS ALT1 TSL 1 (best) BASIC12.55□□□□□ -0.4
RCL1Q9Y2P8 AC131212.3-201ENST00000624087 4219 ntBASIC12.55□□□□□ -0.4
RCL1Q9Y2P8 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
RCL1Q9Y2P8 ABCA2-201ENST00000265662 8154 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
RCL1Q9Y2P8 ACAN-209ENST00000617301 8669 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
RCL1Q9Y2P8 UBE3A-204ENST00000438097 8939 ntAPPRIS P3 TSL 5 BASIC12.55□□□□□ -0.4
RCL1Q9Y2P8 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
RCL1Q9Y2P8 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
RCL1Q9Y2P8 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
RCL1Q9Y2P8 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
RCL1Q9Y2P8 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
RCL1Q9Y2P8 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
RCL1Q9Y2P8 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC12.55□□□□□ -0.4
RCL1Q9Y2P8 PCDHGA11-201ENST00000398587 4647 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
RCL1Q9Y2P8 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
RCL1Q9Y2P8 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC12.55□□□□□ -0.4
RCL1Q9Y2P8 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
RCL1Q9Y2P8 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
RCL1Q9Y2P8 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
RCL1Q9Y2P8 AL359183.1-201ENST00000623796 2132 ntBASIC12.55□□□□□ -0.4
RCL1Q9Y2P8 DMBT1P1-203ENST00000636837 4628 ntBASIC12.55□□□□□ -0.4
RCL1Q9Y2P8 LGALSL-201ENST00000238875 3926 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
RCL1Q9Y2P8 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
RCL1Q9Y2P8 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
RCL1Q9Y2P8 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
RCL1Q9Y2P8 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
RCL1Q9Y2P8 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
RCL1Q9Y2P8 USP4-203ENST00000415188 1454 ntTSL 3 BASIC12.54□□□□□ -0.4
RCL1Q9Y2P8 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
RCL1Q9Y2P8 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC12.54□□□□□ -0.4
RCL1Q9Y2P8 Z82170.1-201ENST00000625081 3192 ntBASIC12.54□□□□□ -0.4
RCL1Q9Y2P8 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
RCL1Q9Y2P8 SFSWAP-210ENST00000541286 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
RCL1Q9Y2P8 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
RCL1Q9Y2P8 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
RCL1Q9Y2P8 RAPGEF3-205ENST00000449771 6061 ntAPPRIS ALT2 TSL 2 BASIC12.54□□□□□ -0.4
RCL1Q9Y2P8 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
RCL1Q9Y2P8 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC12.54□□□□□ -0.4
RCL1Q9Y2P8 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
RCL1Q9Y2P8 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC12.54□□□□□ -0.4
RCL1Q9Y2P8 AC092910.1-201ENST00000482027 1129 ntBASIC12.54□□□□□ -0.4
RCL1Q9Y2P8 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC12.54□□□□□ -0.4
RCL1Q9Y2P8 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC12.54□□□□□ -0.4
RCL1Q9Y2P8 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC12.54□□□□□ -0.4
RCL1Q9Y2P8 UNC93B6-202ENST00000528242 690 ntBASIC12.54□□□□□ -0.4
RCL1Q9Y2P8 TOLLIP-AS1-201ENST00000530897 939 ntBASIC12.54□□□□□ -0.4
RCL1Q9Y2P8 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
RCL1Q9Y2P8 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC12.54□□□□□ -0.4
RCL1Q9Y2P8 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC12.54□□□□□ -0.4
RCL1Q9Y2P8 PRR29-207ENST00000580752 458 ntTSL 3 BASIC12.54□□□□□ -0.4
RCL1Q9Y2P8 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC12.54□□□□□ -0.4
RCL1Q9Y2P8 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC12.54□□□□□ -0.4
RCL1Q9Y2P8 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC12.54□□□□□ -0.4
RCL1Q9Y2P8 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
RCL1Q9Y2P8 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
RCL1Q9Y2P8 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
RCL1Q9Y2P8 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC12.54□□□□□ -0.4
RCL1Q9Y2P8 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
RCL1Q9Y2P8 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
RCL1Q9Y2P8 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC12.54□□□□□ -0.4
RCL1Q9Y2P8 UBE3A-220ENST00000630424 5075 ntAPPRIS P3 TSL 5 BASIC12.54□□□□□ -0.4
RCL1Q9Y2P8 PCDHGA6-202ENST00000610583 5650 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
RCL1Q9Y2P8 LINC01750-202ENST00000438293 3068 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
RCL1Q9Y2P8 PSME3-203ENST00000541124 3366 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
RCL1Q9Y2P8 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC12.54□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms