Protein–RNA interactions for Protein: Q9HBT6

CDH20, Cadherin-20, humanhuman

Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH20Q9HBT6 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC13.41□□□□□ -0.26
CDH20Q9HBT6 B3GAT1-203ENST00000524765 5737 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
CDH20Q9HBT6 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC13.4□□□□□ -0.26
CDH20Q9HBT6 AC006058.4-201ENST00000624016 1670 ntBASIC13.4□□□□□ -0.26
CDH20Q9HBT6 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
CDH20Q9HBT6 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CDH20Q9HBT6 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CDH20Q9HBT6 ANK1-205ENST00000347528 8237 ntAPPRIS P4 TSL 1 (best) BASIC13.4□□□□□ -0.26
CDH20Q9HBT6 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC13.4□□□□□ -0.26
CDH20Q9HBT6 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CDH20Q9HBT6 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
CDH20Q9HBT6 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CDH20Q9HBT6 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CDH20Q9HBT6 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC13.4□□□□□ -0.26
CDH20Q9HBT6 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CDH20Q9HBT6 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
CDH20Q9HBT6 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
CDH20Q9HBT6 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC13.4□□□□□ -0.26
CDH20Q9HBT6 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC13.4□□□□□ -0.26
CDH20Q9HBT6 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CDH20Q9HBT6 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CDH20Q9HBT6 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CDH20Q9HBT6 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
CDH20Q9HBT6 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CDH20Q9HBT6 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CDH20Q9HBT6 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC13.4□□□□□ -0.26
CDH20Q9HBT6 ELK1P1-201ENST00000485699 580 ntBASIC13.4□□□□□ -0.26
CDH20Q9HBT6 AC004066.1-201ENST00000502488 802 ntBASIC13.4□□□□□ -0.26
CDH20Q9HBT6 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC13.4□□□□□ -0.26
CDH20Q9HBT6 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC13.4□□□□□ -0.26
CDH20Q9HBT6 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC13.4□□□□□ -0.26
CDH20Q9HBT6 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
CDH20Q9HBT6 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
CDH20Q9HBT6 AC093813.1-201ENST00000605066 256 ntBASIC13.4□□□□□ -0.26
CDH20Q9HBT6 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
CDH20Q9HBT6 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC13.4□□□□□ -0.26
CDH20Q9HBT6 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC13.4□□□□□ -0.26
CDH20Q9HBT6 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CDH20Q9HBT6 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CDH20Q9HBT6 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CDH20Q9HBT6 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC13.4□□□□□ -0.26
CDH20Q9HBT6 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CDH20Q9HBT6 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CDH20Q9HBT6 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CDH20Q9HBT6 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CDH20Q9HBT6 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CDH20Q9HBT6 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
CDH20Q9HBT6 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CDH20Q9HBT6 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
CDH20Q9HBT6 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.27
CDH20Q9HBT6 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC13.4□□□□□ -0.27
CDH20Q9HBT6 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.27
CDH20Q9HBT6 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
CDH20Q9HBT6 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CDH20Q9HBT6 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC13.39□□□□□ -0.27
CDH20Q9HBT6 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
CDH20Q9HBT6 DRD5P1-201ENST00000456605 1438 ntBASIC13.39□□□□□ -0.27
CDH20Q9HBT6 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
CDH20Q9HBT6 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
CDH20Q9HBT6 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
CDH20Q9HBT6 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CDH20Q9HBT6 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC13.39□□□□□ -0.27
CDH20Q9HBT6 AC022532.1-201ENST00000624563 1728 ntBASIC13.39□□□□□ -0.27
CDH20Q9HBT6 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CDH20Q9HBT6 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC13.39□□□□□ -0.27
CDH20Q9HBT6 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CDH20Q9HBT6 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
CDH20Q9HBT6 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CDH20Q9HBT6 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CDH20Q9HBT6 CRYBG2-201ENST00000308182 5245 ntAPPRIS P5 TSL 5 BASIC13.39□□□□□ -0.27
CDH20Q9HBT6 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
CDH20Q9HBT6 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
CDH20Q9HBT6 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CDH20Q9HBT6 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
CDH20Q9HBT6 AC098614.1-201ENST00000368528 745 ntBASIC13.39□□□□□ -0.27
CDH20Q9HBT6 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
CDH20Q9HBT6 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CDH20Q9HBT6 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC13.39□□□□□ -0.27
CDH20Q9HBT6 DGCR5-201ENST00000399539 862 ntBASIC13.39□□□□□ -0.27
CDH20Q9HBT6 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC13.39□□□□□ -0.27
CDH20Q9HBT6 GALT-202ENST00000450095 1280 ntTSL 2 BASIC13.39□□□□□ -0.27
CDH20Q9HBT6 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC13.39□□□□□ -0.27
CDH20Q9HBT6 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC13.39□□□□□ -0.27
CDH20Q9HBT6 AC026410.3-201ENST00000514280 936 ntBASIC13.39□□□□□ -0.27
CDH20Q9HBT6 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC13.39□□□□□ -0.27
CDH20Q9HBT6 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC13.39□□□□□ -0.27
CDH20Q9HBT6 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC13.39□□□□□ -0.27
CDH20Q9HBT6 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC13.39□□□□□ -0.27
CDH20Q9HBT6 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC13.39□□□□□ -0.27
CDH20Q9HBT6 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC13.39□□□□□ -0.27
CDH20Q9HBT6 AL645728.2-202ENST00000641679 227 ntBASIC13.39□□□□□ -0.27
CDH20Q9HBT6 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
CDH20Q9HBT6 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
CDH20Q9HBT6 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CDH20Q9HBT6 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
CDH20Q9HBT6 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC13.39□□□□□ -0.27
CDH20Q9HBT6 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CDH20Q9HBT6 TNRC18P2-201ENST00000417666 2714 ntBASIC13.39□□□□□ -0.27
CDH20Q9HBT6 AC073347.1-201ENST00000421633 2643 ntBASIC13.39□□□□□ -0.27
CDH20Q9HBT6 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC13.39□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 53.4 ms