Protein–RNA interactions for Protein: Q9HB65

ELL3, RNA polymerase II elongation factor ELL3, humanhuman

Predicted RBP Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ELL3Q9HB65 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
ELL3Q9HB65 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC13.43□□□□□ -0.26
ELL3Q9HB65 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
ELL3Q9HB65 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC13.43□□□□□ -0.26
ELL3Q9HB65 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
ELL3Q9HB65 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC13.43□□□□□ -0.26
ELL3Q9HB65 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC13.43□□□□□ -0.26
ELL3Q9HB65 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC13.43□□□□□ -0.26
ELL3Q9HB65 AC018529.1-201ENST00000613063 361 ntBASIC13.43□□□□□ -0.26
ELL3Q9HB65 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC13.43□□□□□ -0.26
ELL3Q9HB65 MBP-205ENST00000397860 4844 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
ELL3Q9HB65 SESN3-203ENST00000536441 9558 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
ELL3Q9HB65 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
ELL3Q9HB65 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC13.43□□□□□ -0.26
ELL3Q9HB65 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
ELL3Q9HB65 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
ELL3Q9HB65 COL1A1-201ENST00000225964 6727 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
ELL3Q9HB65 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC13.43□□□□□ -0.26
ELL3Q9HB65 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
ELL3Q9HB65 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
ELL3Q9HB65 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
ELL3Q9HB65 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC13.43□□□□□ -0.26
ELL3Q9HB65 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
ELL3Q9HB65 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC13.43□□□□□ -0.26
ELL3Q9HB65 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
ELL3Q9HB65 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
ELL3Q9HB65 CICP23-201ENST00000605013 2741 ntBASIC13.42□□□□□ -0.26
ELL3Q9HB65 CACNA2D2-204ENST00000424201 5206 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
ELL3Q9HB65 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC13.42□□□□□ -0.26
ELL3Q9HB65 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
ELL3Q9HB65 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC13.42□□□□□ -0.26
ELL3Q9HB65 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
ELL3Q9HB65 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC13.42□□□□□ -0.26
ELL3Q9HB65 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
ELL3Q9HB65 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
ELL3Q9HB65 TRAF3-208ENST00000560371 7640 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
ELL3Q9HB65 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC13.42□□□□□ -0.26
ELL3Q9HB65 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
ELL3Q9HB65 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
ELL3Q9HB65 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC13.42□□□□□ -0.26
ELL3Q9HB65 VPS29-207ENST00000549970 818 ntTSL 3 BASIC13.42□□□□□ -0.26
ELL3Q9HB65 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC13.42□□□□□ -0.26
ELL3Q9HB65 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC13.42□□□□□ -0.26
ELL3Q9HB65 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
ELL3Q9HB65 AP001059.3-201ENST00000619053 235 ntBASIC13.42□□□□□ -0.26
ELL3Q9HB65 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC13.42□□□□□ -0.26
ELL3Q9HB65 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC13.42□□□□□ -0.26
ELL3Q9HB65 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC13.42□□□□□ -0.26
ELL3Q9HB65 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
ELL3Q9HB65 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC13.42□□□□□ -0.26
ELL3Q9HB65 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC13.42□□□□□ -0.26
ELL3Q9HB65 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
ELL3Q9HB65 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
ELL3Q9HB65 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC13.42□□□□□ -0.26
ELL3Q9HB65 GPI-205ENST00000586425 1799 ntTSL 5 BASIC13.42□□□□□ -0.26
ELL3Q9HB65 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
ELL3Q9HB65 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
ELL3Q9HB65 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
ELL3Q9HB65 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
ELL3Q9HB65 GRAMD4-202ENST00000406902 4484 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
ELL3Q9HB65 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
ELL3Q9HB65 WNT5A-202ENST00000474267 6042 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
ELL3Q9HB65 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC13.42□□□□□ -0.26
ELL3Q9HB65 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
ELL3Q9HB65 LINC01101-201ENST00000622953 1884 ntBASIC13.42□□□□□ -0.26
ELL3Q9HB65 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
ELL3Q9HB65 TOM1L2-214ENST00000581396 5595 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
ELL3Q9HB65 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC13.41□□□□□ -0.26
ELL3Q9HB65 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC13.41□□□□□ -0.26
ELL3Q9HB65 ATN1-201ENST00000356654 4351 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
ELL3Q9HB65 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
ELL3Q9HB65 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
ELL3Q9HB65 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC13.41□□□□□ -0.26
ELL3Q9HB65 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
ELL3Q9HB65 LAMB2-201ENST00000305544 5643 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
ELL3Q9HB65 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC13.41□□□□□ -0.26
ELL3Q9HB65 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC13.41□□□□□ -0.26
ELL3Q9HB65 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
ELL3Q9HB65 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC13.41□□□□□ -0.26
ELL3Q9HB65 SYNPO-205ENST00000522122 5098 ntAPPRIS ALT2 TSL 2 BASIC13.41□□□□□ -0.26
ELL3Q9HB65 LYN-204ENST00000520220 5808 ntAPPRIS ALT1 TSL 1 (best) BASIC13.41□□□□□ -0.26
ELL3Q9HB65 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC13.41□□□□□ -0.26
ELL3Q9HB65 NSD2-204ENST00000382891 7534 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
ELL3Q9HB65 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
ELL3Q9HB65 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC13.41□□□□□ -0.26
ELL3Q9HB65 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
ELL3Q9HB65 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
ELL3Q9HB65 UBE3A-226ENST00000637886 8725 ntAPPRIS ALT1 TSL 5 BASIC13.41□□□□□ -0.26
ELL3Q9HB65 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
ELL3Q9HB65 NR3C2-209ENST00000625323 5909 ntTSL 5 BASIC13.41□□□□□ -0.26
ELL3Q9HB65 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
ELL3Q9HB65 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC13.41□□□□□ -0.26
ELL3Q9HB65 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC13.41□□□□□ -0.26
ELL3Q9HB65 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC13.41□□□□□ -0.26
ELL3Q9HB65 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC13.41□□□□□ -0.26
ELL3Q9HB65 MTND6P24-201ENST00000440466 518 ntBASIC13.41□□□□□ -0.26
ELL3Q9HB65 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC13.41□□□□□ -0.26
ELL3Q9HB65 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC13.41□□□□□ -0.26
ELL3Q9HB65 SLBP-205ENST00000488267 987 ntTSL 2 BASIC13.41□□□□□ -0.26
ELL3Q9HB65 HLA-J-203ENST00000494367 1087 ntBASIC13.41□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms