Protein–RNA interactions for Protein: Q9BY60

GABARAPL3, Gamma-aminobutyric acid receptor-associated protein-like 3, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABARAPL3Q9BY60 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
GABARAPL3Q9BY60 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
GABARAPL3Q9BY60 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
GABARAPL3Q9BY60 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC13.9□□□□□ -0.18
GABARAPL3Q9BY60 TP73-209ENST00000603362 1668 ntTSL 5 BASIC13.9□□□□□ -0.18
GABARAPL3Q9BY60 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
GABARAPL3Q9BY60 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC13.9□□□□□ -0.18
GABARAPL3Q9BY60 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
GABARAPL3Q9BY60 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
GABARAPL3Q9BY60 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC13.9□□□□□ -0.18
GABARAPL3Q9BY60 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
GABARAPL3Q9BY60 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
GABARAPL3Q9BY60 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
GABARAPL3Q9BY60 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
GABARAPL3Q9BY60 OPRL1-201ENST00000336866 3321 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
GABARAPL3Q9BY60 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
GABARAPL3Q9BY60 AC090505.1-201ENST00000430515 1834 ntBASIC13.9□□□□□ -0.18
GABARAPL3Q9BY60 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
GABARAPL3Q9BY60 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
GABARAPL3Q9BY60 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.19
GABARAPL3Q9BY60 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
GABARAPL3Q9BY60 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC13.9□□□□□ -0.19
GABARAPL3Q9BY60 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
GABARAPL3Q9BY60 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
GABARAPL3Q9BY60 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
GABARAPL3Q9BY60 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
GABARAPL3Q9BY60 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC13.89□□□□□ -0.19
GABARAPL3Q9BY60 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC13.89□□□□□ -0.19
GABARAPL3Q9BY60 INE2-201ENST00000630399 1874 ntBASIC13.89□□□□□ -0.19
GABARAPL3Q9BY60 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC13.89□□□□□ -0.19
GABARAPL3Q9BY60 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
GABARAPL3Q9BY60 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
GABARAPL3Q9BY60 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC13.89□□□□□ -0.19
GABARAPL3Q9BY60 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC13.89□□□□□ -0.19
GABARAPL3Q9BY60 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
GABARAPL3Q9BY60 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
GABARAPL3Q9BY60 AC015922.1-201ENST00000421102 1152 ntBASIC13.89□□□□□ -0.19
GABARAPL3Q9BY60 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
GABARAPL3Q9BY60 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC13.89□□□□□ -0.19
GABARAPL3Q9BY60 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC13.89□□□□□ -0.19
GABARAPL3Q9BY60 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
GABARAPL3Q9BY60 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC13.89□□□□□ -0.19
GABARAPL3Q9BY60 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
GABARAPL3Q9BY60 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
GABARAPL3Q9BY60 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC13.89□□□□□ -0.19
GABARAPL3Q9BY60 LITAF-210ENST00000571976 548 ntTSL 2 BASIC13.89□□□□□ -0.19
GABARAPL3Q9BY60 LITAF-214ENST00000574703 486 ntTSL 2 BASIC13.89□□□□□ -0.19
GABARAPL3Q9BY60 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC13.89□□□□□ -0.19
GABARAPL3Q9BY60 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC13.89□□□□□ -0.19
GABARAPL3Q9BY60 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC13.89□□□□□ -0.19
GABARAPL3Q9BY60 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC13.89□□□□□ -0.19
GABARAPL3Q9BY60 GPR39-203ENST00000622084 900 ntTSL 5 BASIC13.89□□□□□ -0.19
GABARAPL3Q9BY60 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC13.89□□□□□ -0.19
GABARAPL3Q9BY60 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC13.89□□□□□ -0.19
GABARAPL3Q9BY60 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC13.89□□□□□ -0.19
GABARAPL3Q9BY60 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
GABARAPL3Q9BY60 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
GABARAPL3Q9BY60 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
GABARAPL3Q9BY60 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
GABARAPL3Q9BY60 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
GABARAPL3Q9BY60 AL121723.1-201ENST00000445194 1519 ntBASIC13.89□□□□□ -0.19
GABARAPL3Q9BY60 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC13.89□□□□□ -0.19
GABARAPL3Q9BY60 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
GABARAPL3Q9BY60 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
GABARAPL3Q9BY60 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
GABARAPL3Q9BY60 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
GABARAPL3Q9BY60 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC13.89□□□□□ -0.19
GABARAPL3Q9BY60 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
GABARAPL3Q9BY60 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
GABARAPL3Q9BY60 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
GABARAPL3Q9BY60 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
GABARAPL3Q9BY60 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
GABARAPL3Q9BY60 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC13.89□□□□□ -0.19
GABARAPL3Q9BY60 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC13.89□□□□□ -0.19
GABARAPL3Q9BY60 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
GABARAPL3Q9BY60 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
GABARAPL3Q9BY60 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
GABARAPL3Q9BY60 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC13.88□□□□□ -0.19
GABARAPL3Q9BY60 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC13.88□□□□□ -0.19
GABARAPL3Q9BY60 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
GABARAPL3Q9BY60 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
GABARAPL3Q9BY60 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC13.88□□□□□ -0.19
GABARAPL3Q9BY60 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
GABARAPL3Q9BY60 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
GABARAPL3Q9BY60 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
GABARAPL3Q9BY60 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC13.88□□□□□ -0.19
GABARAPL3Q9BY60 STC1-202ENST00000524323 1748 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
GABARAPL3Q9BY60 AC097376.2-205ENST00000610159 5334 ntBASIC13.88□□□□□ -0.19
GABARAPL3Q9BY60 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
GABARAPL3Q9BY60 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
GABARAPL3Q9BY60 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
GABARAPL3Q9BY60 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
GABARAPL3Q9BY60 TIMM8BP1-201ENST00000452384 211 ntBASIC13.88□□□□□ -0.19
GABARAPL3Q9BY60 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC13.88□□□□□ -0.19
GABARAPL3Q9BY60 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC13.88□□□□□ -0.19
GABARAPL3Q9BY60 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC13.88□□□□□ -0.19
GABARAPL3Q9BY60 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC13.88□□□□□ -0.19
GABARAPL3Q9BY60 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC13.88□□□□□ -0.19
GABARAPL3Q9BY60 AC018529.1-201ENST00000613063 361 ntBASIC13.88□□□□□ -0.19
GABARAPL3Q9BY60 IRF5-214ENST00000613821 595 ntTSL 5 BASIC13.88□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms