Protein–RNA interactions for Protein: Q96MD7

C9orf85, Uncharacterized protein C9orf85, humanhuman

Predictions only

Length 179 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf85Q96MD7 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC11.09□□□□□ -0.63
C9orf85Q96MD7 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
C9orf85Q96MD7 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
C9orf85Q96MD7 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC11.09□□□□□ -0.63
C9orf85Q96MD7 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC11.09□□□□□ -0.63
C9orf85Q96MD7 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
C9orf85Q96MD7 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC11.09□□□□□ -0.63
C9orf85Q96MD7 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
C9orf85Q96MD7 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
C9orf85Q96MD7 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
C9orf85Q96MD7 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
C9orf85Q96MD7 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC11.08□□□□□ -0.63
C9orf85Q96MD7 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC11.08□□□□□ -0.63
C9orf85Q96MD7 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC11.08□□□□□ -0.64
C9orf85Q96MD7 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC11.08□□□□□ -0.64
C9orf85Q96MD7 AC097376.2-205ENST00000610159 5334 ntBASIC11.08□□□□□ -0.64
C9orf85Q96MD7 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
C9orf85Q96MD7 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC11.08□□□□□ -0.64
C9orf85Q96MD7 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
C9orf85Q96MD7 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
C9orf85Q96MD7 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC11.08□□□□□ -0.64
C9orf85Q96MD7 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
C9orf85Q96MD7 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC11.08□□□□□ -0.64
C9orf85Q96MD7 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC11.08□□□□□ -0.64
C9orf85Q96MD7 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC11.08□□□□□ -0.64
C9orf85Q96MD7 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
C9orf85Q96MD7 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
C9orf85Q96MD7 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC11.08□□□□□ -0.64
C9orf85Q96MD7 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC11.08□□□□□ -0.64
C9orf85Q96MD7 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC11.08□□□□□ -0.64
C9orf85Q96MD7 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC11.08□□□□□ -0.64
C9orf85Q96MD7 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC11.08□□□□□ -0.64
C9orf85Q96MD7 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC11.08□□□□□ -0.64
C9orf85Q96MD7 HNRNPFP1-201ENST00000391730 1133 ntBASIC11.08□□□□□ -0.64
C9orf85Q96MD7 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC11.08□□□□□ -0.64
C9orf85Q96MD7 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC11.08□□□□□ -0.64
C9orf85Q96MD7 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC11.08□□□□□ -0.64
C9orf85Q96MD7 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC11.08□□□□□ -0.64
C9orf85Q96MD7 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC11.08□□□□□ -0.64
C9orf85Q96MD7 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC11.08□□□□□ -0.64
C9orf85Q96MD7 AC109322.1-201ENST00000524499 1264 ntBASIC11.08□□□□□ -0.64
C9orf85Q96MD7 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC11.08□□□□□ -0.64
C9orf85Q96MD7 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC11.08□□□□□ -0.64
C9orf85Q96MD7 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC11.08□□□□□ -0.64
C9orf85Q96MD7 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC11.08□□□□□ -0.64
C9orf85Q96MD7 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC11.08□□□□□ -0.64
C9orf85Q96MD7 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC11.08□□□□□ -0.64
C9orf85Q96MD7 INO80C-210ENST00000590757 595 ntTSL 2 BASIC11.08□□□□□ -0.64
C9orf85Q96MD7 5S_rRNA.22-201ENST00000614916 106 ntBASIC11.08□□□□□ -0.64
C9orf85Q96MD7 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
C9orf85Q96MD7 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC11.08□□□□□ -0.64
C9orf85Q96MD7 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
C9orf85Q96MD7 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
C9orf85Q96MD7 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC11.08□□□□□ -0.64
C9orf85Q96MD7 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC11.08□□□□□ -0.64
C9orf85Q96MD7 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
C9orf85Q96MD7 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
C9orf85Q96MD7 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
C9orf85Q96MD7 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
C9orf85Q96MD7 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
C9orf85Q96MD7 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
C9orf85Q96MD7 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
C9orf85Q96MD7 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC11.08□□□□□ -0.64
C9orf85Q96MD7 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
C9orf85Q96MD7 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
C9orf85Q96MD7 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
C9orf85Q96MD7 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC11.08□□□□□ -0.64
C9orf85Q96MD7 AC015802.1-201ENST00000588104 1449 ntBASIC11.08□□□□□ -0.64
C9orf85Q96MD7 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
C9orf85Q96MD7 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
C9orf85Q96MD7 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
C9orf85Q96MD7 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
C9orf85Q96MD7 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC11.08□□□□□ -0.64
C9orf85Q96MD7 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
C9orf85Q96MD7 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
C9orf85Q96MD7 AC087499.5-201ENST00000452760 1342 ntBASIC11.08□□□□□ -0.64
C9orf85Q96MD7 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC11.08□□□□□ -0.64
C9orf85Q96MD7 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
C9orf85Q96MD7 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
C9orf85Q96MD7 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC11.08□□□□□ -0.64
C9orf85Q96MD7 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC11.08□□□□□ -0.64
C9orf85Q96MD7 PID1-202ENST00000392054 2745 ntTSL 2 BASIC11.08□□□□□ -0.64
C9orf85Q96MD7 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
C9orf85Q96MD7 TKT-201ENST00000296289 1931 ntTSL 5 BASIC11.07□□□□□ -0.64
C9orf85Q96MD7 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC11.07□□□□□ -0.64
C9orf85Q96MD7 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
C9orf85Q96MD7 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
C9orf85Q96MD7 HSPA7-201ENST00000445535 1927 ntBASIC11.07□□□□□ -0.64
C9orf85Q96MD7 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
C9orf85Q96MD7 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC11.07□□□□□ -0.64
C9orf85Q96MD7 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC11.07□□□□□ -0.64
C9orf85Q96MD7 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
C9orf85Q96MD7 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
C9orf85Q96MD7 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
C9orf85Q96MD7 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
C9orf85Q96MD7 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC11.07□□□□□ -0.64
C9orf85Q96MD7 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC11.07□□□□□ -0.64
C9orf85Q96MD7 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
C9orf85Q96MD7 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC11.07□□□□□ -0.64
C9orf85Q96MD7 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms