Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
HMGCS1Q01581 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
HMGCS1Q01581 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC14.76□□□□□ -0.05
HMGCS1Q01581 UCKL1-AS1-201ENST00000623569 3602 ntBASIC14.76□□□□□ -0.05
HMGCS1Q01581 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
HMGCS1Q01581 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
HMGCS1Q01581 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
HMGCS1Q01581 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
HMGCS1Q01581 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
HMGCS1Q01581 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
HMGCS1Q01581 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
HMGCS1Q01581 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
HMGCS1Q01581 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
HMGCS1Q01581 PKIG-203ENST00000372887 769 ntTSL 3 BASIC14.76□□□□□ -0.05
HMGCS1Q01581 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC14.76□□□□□ -0.05
HMGCS1Q01581 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC14.76□□□□□ -0.05
HMGCS1Q01581 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
HMGCS1Q01581 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
HMGCS1Q01581 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC14.76□□□□□ -0.05
HMGCS1Q01581 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC14.76□□□□□ -0.05
HMGCS1Q01581 AC009477.1-201ENST00000452936 217 ntBASIC14.76□□□□□ -0.05
HMGCS1Q01581 AL589987.1-201ENST00000453380 819 ntBASIC14.76□□□□□ -0.05
HMGCS1Q01581 AC092337.1-201ENST00000568699 1129 ntBASIC14.76□□□□□ -0.05
HMGCS1Q01581 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC14.76□□□□□ -0.05
HMGCS1Q01581 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC14.76□□□□□ -0.05
HMGCS1Q01581 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
HMGCS1Q01581 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
HMGCS1Q01581 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC14.76□□□□□ -0.05
HMGCS1Q01581 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
HMGCS1Q01581 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC14.76□□□□□ -0.05
HMGCS1Q01581 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
HMGCS1Q01581 AC117489.1-201ENST00000625169 3217 ntBASIC14.76□□□□□ -0.05
HMGCS1Q01581 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
HMGCS1Q01581 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC14.76□□□□□ -0.05
HMGCS1Q01581 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC14.76□□□□□ -0.05
HMGCS1Q01581 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
HMGCS1Q01581 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC14.76□□□□□ -0.05
HMGCS1Q01581 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
HMGCS1Q01581 AC005089.1-201ENST00000619486 2241 ntBASIC14.76□□□□□ -0.05
HMGCS1Q01581 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
HMGCS1Q01581 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
HMGCS1Q01581 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
HMGCS1Q01581 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC14.75□□□□□ -0.05
HMGCS1Q01581 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC14.75□□□□□ -0.05
HMGCS1Q01581 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
HMGCS1Q01581 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
HMGCS1Q01581 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC14.75□□□□□ -0.05
HMGCS1Q01581 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
HMGCS1Q01581 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC14.75□□□□□ -0.05
HMGCS1Q01581 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
HMGCS1Q01581 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC14.75□□□□□ -0.05
HMGCS1Q01581 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC14.75□□□□□ -0.05
HMGCS1Q01581 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
HMGCS1Q01581 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
HMGCS1Q01581 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC14.75□□□□□ -0.05
HMGCS1Q01581 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
HMGCS1Q01581 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC14.75□□□□□ -0.05
HMGCS1Q01581 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC14.75□□□□□ -0.05
HMGCS1Q01581 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
HMGCS1Q01581 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC14.75□□□□□ -0.05
HMGCS1Q01581 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
HMGCS1Q01581 SYS1-203ENST00000414310 795 ntTSL 3 BASIC14.75□□□□□ -0.05
HMGCS1Q01581 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC14.75□□□□□ -0.05
HMGCS1Q01581 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
HMGCS1Q01581 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
HMGCS1Q01581 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC14.75□□□□□ -0.05
HMGCS1Q01581 SAMD11P1-201ENST00000571429 661 ntBASIC14.75□□□□□ -0.05
HMGCS1Q01581 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC14.75□□□□□ -0.05
HMGCS1Q01581 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC14.75□□□□□ -0.05
HMGCS1Q01581 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
HMGCS1Q01581 AL390754.1-201ENST00000619088 582 ntBASIC14.75□□□□□ -0.05
HMGCS1Q01581 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
HMGCS1Q01581 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC14.75□□□□□ -0.05
HMGCS1Q01581 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
HMGCS1Q01581 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
HMGCS1Q01581 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
HMGCS1Q01581 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC14.75□□□□□ -0.05
HMGCS1Q01581 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC14.75□□□□□ -0.05
HMGCS1Q01581 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
HMGCS1Q01581 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
HMGCS1Q01581 AC097376.2-205ENST00000610159 5334 ntBASIC14.75□□□□□ -0.05
HMGCS1Q01581 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC14.75□□□□□ -0.05
HMGCS1Q01581 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
HMGCS1Q01581 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
HMGCS1Q01581 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
HMGCS1Q01581 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
HMGCS1Q01581 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC14.75□□□□□ -0.05
HMGCS1Q01581 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC14.75□□□□□ -0.05
HMGCS1Q01581 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
HMGCS1Q01581 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC14.75□□□□□ -0.05
HMGCS1Q01581 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
HMGCS1Q01581 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
HMGCS1Q01581 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC14.74□□□□□ -0.05
HMGCS1Q01581 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
HMGCS1Q01581 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
HMGCS1Q01581 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
HMGCS1Q01581 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
HMGCS1Q01581 RERG-209ENST00000546331 1383 ntTSL 2 BASIC14.74□□□□□ -0.05
HMGCS1Q01581 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC14.74□□□□□ -0.05
HMGCS1Q01581 GOLGA8DP-202ENST00000341390 2184 ntBASIC14.74□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 67.3 ms