Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 EPHB1-201ENST00000398015 4672 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
AP3S2P59780 SYT12-201ENST00000393946 4534 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
AP3S2P59780 ADGRL1-201ENST00000340736 7853 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
AP3S2P59780 CTCFL-205ENST00000423479 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
AP3S2P59780 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
AP3S2P59780 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
AP3S2P59780 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
AP3S2P59780 DHX16-202ENST00000376442 3445 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
AP3S2P59780 SAMD4A-202ENST00000392067 6833 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
AP3S2P59780 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
AP3S2P59780 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
AP3S2P59780 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
AP3S2P59780 GUK1-204ENST00000366721 689 ntTSL 3 BASIC13.17□□□□□ -0.3
AP3S2P59780 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC13.17□□□□□ -0.3
AP3S2P59780 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC13.17□□□□□ -0.3
AP3S2P59780 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
AP3S2P59780 ELP6-209ENST00000446787 894 ntTSL 3 BASIC13.17□□□□□ -0.3
AP3S2P59780 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
AP3S2P59780 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC13.17□□□□□ -0.3
AP3S2P59780 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC13.17□□□□□ -0.3
AP3S2P59780 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC13.17□□□□□ -0.3
AP3S2P59780 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC13.17□□□□□ -0.3
AP3S2P59780 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC13.17□□□□□ -0.3
AP3S2P59780 AC097359.3-201ENST00000603982 1210 ntBASIC13.17□□□□□ -0.3
AP3S2P59780 AL732292.2-201ENST00000609649 430 ntBASIC13.17□□□□□ -0.3
AP3S2P59780 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC13.17□□□□□ -0.3
AP3S2P59780 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
AP3S2P59780 MON1B-201ENST00000248248 6091 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
AP3S2P59780 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
AP3S2P59780 LMBR1-201ENST00000353442 7997 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
AP3S2P59780 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
AP3S2P59780 PPT1-213ENST00000641319 2388 ntBASIC13.17□□□□□ -0.3
AP3S2P59780 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
AP3S2P59780 EHD1-202ENST00000359393 3618 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
AP3S2P59780 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
AP3S2P59780 C7orf57-203ENST00000430738 2056 ntTSL 5 BASIC13.17□□□□□ -0.3
AP3S2P59780 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
AP3S2P59780 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
AP3S2P59780 RER1-207ENST00000488353 2469 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
AP3S2P59780 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC13.17□□□□□ -0.3
AP3S2P59780 SSTR3-201ENST00000610913 4100 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
AP3S2P59780 BCL2L11-221ENST00000621302 5224 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
AP3S2P59780 BCL2L11-222ENST00000622509 5231 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
AP3S2P59780 MPLKIP-201ENST00000306984 7668 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
AP3S2P59780 LHX1-201ENST00000614239 3425 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
AP3S2P59780 ELAVL1-201ENST00000407627 6015 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
AP3S2P59780 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC13.17□□□□□ -0.3
AP3S2P59780 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
AP3S2P59780 NUTM2E-201ENST00000429984 3292 ntAPPRIS P5 TSL 5 BASIC13.17□□□□□ -0.3
AP3S2P59780 NHLH2-202ENST00000369506 7226 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
AP3S2P59780 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
AP3S2P59780 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
AP3S2P59780 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
AP3S2P59780 CLUAP1-202ENST00000571025 5126 ntTSL 2 BASIC13.17□□□□□ -0.3
AP3S2P59780 NEFH-201ENST00000310624 3783 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
AP3S2P59780 DGCR9-201ENST00000609630 2415 ntBASIC13.17□□□□□ -0.3
AP3S2P59780 HECTD2-201ENST00000298068 4802 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
AP3S2P59780 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC13.16□□□□□ -0.3
AP3S2P59780 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
AP3S2P59780 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
AP3S2P59780 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
AP3S2P59780 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
AP3S2P59780 GPT2-201ENST00000340124 3984 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
AP3S2P59780 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
AP3S2P59780 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
AP3S2P59780 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC13.16□□□□□ -0.3
AP3S2P59780 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
AP3S2P59780 DNAJC13-201ENST00000260818 7730 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
AP3S2P59780 HNRNPH1-204ENST00000442819 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
AP3S2P59780 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC13.16□□□□□ -0.3
AP3S2P59780 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
AP3S2P59780 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC13.16□□□□□ -0.3
AP3S2P59780 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
AP3S2P59780 NAA15-202ENST00000398947 6072 ntAPPRIS ALT1 TSL 5 BASIC13.16□□□□□ -0.3
AP3S2P59780 TNNI1-202ENST00000361379 5413 ntAPPRIS P2 TSL 5 BASIC13.16□□□□□ -0.3
AP3S2P59780 ZFYVE28-211ENST00000515312 3247 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
AP3S2P59780 LINC01873-201ENST00000428647 1679 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
AP3S2P59780 ATN1-201ENST00000356654 4351 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
AP3S2P59780 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC13.16□□□□□ -0.3
AP3S2P59780 OFD1-204ENST00000398395 3307 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
AP3S2P59780 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
AP3S2P59780 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
AP3S2P59780 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
AP3S2P59780 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC13.16□□□□□ -0.3
AP3S2P59780 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC13.16□□□□□ -0.3
AP3S2P59780 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC13.16□□□□□ -0.3
AP3S2P59780 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC13.16□□□□□ -0.3
AP3S2P59780 AC108073.2-201ENST00000464002 357 ntBASIC13.16□□□□□ -0.3
AP3S2P59780 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC13.16□□□□□ -0.3
AP3S2P59780 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
AP3S2P59780 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC13.16□□□□□ -0.3
AP3S2P59780 AC021087.4-201ENST00000563761 564 ntBASIC13.16□□□□□ -0.3
AP3S2P59780 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC13.16□□□□□ -0.3
AP3S2P59780 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
AP3S2P59780 BCL10-202ENST00000620248 774 ntTSL 5 BASIC13.16□□□□□ -0.3
AP3S2P59780 AC004790.2-201ENST00000623588 572 ntBASIC13.16□□□□□ -0.3
AP3S2P59780 SERPINA4-203ENST00000557004 2012 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
AP3S2P59780 PDE2A-206ENST00000444035 4193 ntAPPRIS ALT1 TSL 5 BASIC13.16□□□□□ -0.3
AP3S2P59780 RIN3-201ENST00000216487 3859 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
AP3S2P59780 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC13.16□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 60.2 ms