Protein–RNA interactions for Protein: P54760

EPHB4, Ephrin type-B receptor 4, humanhuman

Predictions only

Length 987 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4P54760 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC17.2■□□□□ 0.34
EPHB4P54760 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
EPHB4P54760 ACKR1-201ENST00000368121 1240 ntBASIC17.2■□□□□ 0.34
EPHB4P54760 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
EPHB4P54760 IGHV3-21-201ENST00000390607 430 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
EPHB4P54760 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
EPHB4P54760 KRTAP10-13P-201ENST00000412914 571 ntBASIC17.2■□□□□ 0.34
EPHB4P54760 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC17.2■□□□□ 0.34
EPHB4P54760 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC17.2■□□□□ 0.34
EPHB4P54760 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC17.2■□□□□ 0.34
EPHB4P54760 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC17.2■□□□□ 0.34
EPHB4P54760 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC17.2■□□□□ 0.34
EPHB4P54760 AC008736.2-201ENST00000587554 516 ntTSL 2 BASIC17.2■□□□□ 0.34
EPHB4P54760 AC020914.3-201ENST00000594712 304 ntBASIC17.2■□□□□ 0.34
EPHB4P54760 SPCS2P2-201ENST00000603270 608 ntBASIC17.2■□□□□ 0.34
EPHB4P54760 AL096828.3-201ENST00000615354 462 ntBASIC17.2■□□□□ 0.34
EPHB4P54760 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC17.2■□□□□ 0.34
EPHB4P54760 AC138951.2-201ENST00000623455 1161 ntBASIC17.2■□□□□ 0.34
EPHB4P54760 AC128714.1-201ENST00000637035 887 ntBASIC17.2■□□□□ 0.34
EPHB4P54760 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC17.2■□□□□ 0.34
EPHB4P54760 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
EPHB4P54760 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
EPHB4P54760 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
EPHB4P54760 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
EPHB4P54760 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
EPHB4P54760 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
EPHB4P54760 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
EPHB4P54760 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
EPHB4P54760 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
EPHB4P54760 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC17.2■□□□□ 0.34
EPHB4P54760 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
EPHB4P54760 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC17.2■□□□□ 0.34
EPHB4P54760 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC17.2■□□□□ 0.34
EPHB4P54760 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC17.2■□□□□ 0.34
EPHB4P54760 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
EPHB4P54760 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
EPHB4P54760 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC17.19■□□□□ 0.34
EPHB4P54760 BNIP3P1-202ENST00000550043 1585 ntBASIC17.19■□□□□ 0.34
EPHB4P54760 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
EPHB4P54760 AC006486.2-201ENST00000624246 2199 ntBASIC17.19■□□□□ 0.34
EPHB4P54760 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
EPHB4P54760 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
EPHB4P54760 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC17.19■□□□□ 0.34
EPHB4P54760 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
EPHB4P54760 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC17.19■□□□□ 0.34
EPHB4P54760 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
EPHB4P54760 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC17.19■□□□□ 0.34
EPHB4P54760 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
EPHB4P54760 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
EPHB4P54760 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
EPHB4P54760 CAMKMT-203ENST00000403853 1114 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
EPHB4P54760 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC17.19■□□□□ 0.34
EPHB4P54760 MTX1P1-201ENST00000440904 838 ntBASIC17.19■□□□□ 0.34
EPHB4P54760 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC17.19■□□□□ 0.34
EPHB4P54760 BHMT-206ENST00000524080 1207 ntTSL 2 BASIC17.19■□□□□ 0.34
EPHB4P54760 IFT20-206ENST00000578122 834 ntTSL 2 BASIC17.19■□□□□ 0.34
EPHB4P54760 IFT20-208ENST00000578985 831 ntTSL 3 BASIC17.19■□□□□ 0.34
EPHB4P54760 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
EPHB4P54760 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
EPHB4P54760 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC17.19■□□□□ 0.34
EPHB4P54760 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC17.19■□□□□ 0.34
EPHB4P54760 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC17.19■□□□□ 0.34
EPHB4P54760 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
EPHB4P54760 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
EPHB4P54760 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
EPHB4P54760 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC17.19■□□□□ 0.34
EPHB4P54760 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
EPHB4P54760 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
EPHB4P54760 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
EPHB4P54760 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
EPHB4P54760 C1R-202ENST00000536053 2347 ntTSL 2 BASIC17.19■□□□□ 0.34
EPHB4P54760 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
EPHB4P54760 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
EPHB4P54760 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
EPHB4P54760 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
EPHB4P54760 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
EPHB4P54760 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
EPHB4P54760 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
EPHB4P54760 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC17.18■□□□□ 0.34
EPHB4P54760 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
EPHB4P54760 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
EPHB4P54760 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
EPHB4P54760 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
EPHB4P54760 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
EPHB4P54760 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC17.18■□□□□ 0.34
EPHB4P54760 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
EPHB4P54760 AL009178.2-201ENST00000597278 2719 ntBASIC17.18■□□□□ 0.34
EPHB4P54760 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
EPHB4P54760 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
EPHB4P54760 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
EPHB4P54760 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC17.18■□□□□ 0.34
EPHB4P54760 MIR648-201ENST00000385046 94 ntBASIC17.18■□□□□ 0.34
EPHB4P54760 VCPKMT-201ENST00000395859 795 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
EPHB4P54760 HNRNPA1P32-201ENST00000396326 963 ntBASIC17.18■□□□□ 0.34
EPHB4P54760 AC253536.4-201ENST00000440539 267 ntBASIC17.18■□□□□ 0.34
EPHB4P54760 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
EPHB4P54760 LINC00642-202ENST00000442515 670 ntTSL 3 BASIC17.18■□□□□ 0.34
EPHB4P54760 HOMER2P2-201ENST00000451621 847 ntBASIC17.18■□□□□ 0.34
EPHB4P54760 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC17.18■□□□□ 0.34
EPHB4P54760 RPS2P36-201ENST00000456516 831 ntBASIC17.18■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms