Protein–RNA interactions for Protein: P48668

KRT6C, Keratin, type II cytoskeletal 6C, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6CP48668 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
KRT6CP48668 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
KRT6CP48668 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
KRT6CP48668 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
KRT6CP48668 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
KRT6CP48668 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC14.88□□□□□ -0.03
KRT6CP48668 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
KRT6CP48668 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
KRT6CP48668 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
KRT6CP48668 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
KRT6CP48668 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
KRT6CP48668 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
KRT6CP48668 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC14.88□□□□□ -0.03
KRT6CP48668 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
KRT6CP48668 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
KRT6CP48668 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
KRT6CP48668 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
KRT6CP48668 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC14.88□□□□□ -0.03
KRT6CP48668 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC14.88□□□□□ -0.03
KRT6CP48668 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
KRT6CP48668 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
KRT6CP48668 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC14.88□□□□□ -0.03
KRT6CP48668 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
KRT6CP48668 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
KRT6CP48668 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC14.88□□□□□ -0.03
KRT6CP48668 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC14.88□□□□□ -0.03
KRT6CP48668 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
KRT6CP48668 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
KRT6CP48668 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
KRT6CP48668 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC14.88□□□□□ -0.03
KRT6CP48668 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
KRT6CP48668 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC14.88□□□□□ -0.03
KRT6CP48668 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC14.88□□□□□ -0.03
KRT6CP48668 AC000095.1-201ENST00000603208 874 ntBASIC14.88□□□□□ -0.03
KRT6CP48668 AC004461.2-201ENST00000629517 803 ntBASIC14.88□□□□□ -0.03
KRT6CP48668 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
KRT6CP48668 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC14.88□□□□□ -0.03
KRT6CP48668 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC14.88□□□□□ -0.03
KRT6CP48668 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
KRT6CP48668 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC14.88□□□□□ -0.03
KRT6CP48668 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
KRT6CP48668 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC14.88□□□□□ -0.03
KRT6CP48668 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
KRT6CP48668 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC14.88□□□□□ -0.03
KRT6CP48668 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
KRT6CP48668 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
KRT6CP48668 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
KRT6CP48668 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
KRT6CP48668 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC14.88□□□□□ -0.03
KRT6CP48668 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC14.88□□□□□ -0.03
KRT6CP48668 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
KRT6CP48668 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC14.88□□□□□ -0.03
KRT6CP48668 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
KRT6CP48668 REXO1L4P-201ENST00000605109 1937 ntBASIC14.88□□□□□ -0.03
KRT6CP48668 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
KRT6CP48668 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC14.88□□□□□ -0.03
KRT6CP48668 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
KRT6CP48668 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
KRT6CP48668 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC14.87□□□□□ -0.03
KRT6CP48668 AC007686.3-201ENST00000619017 3487 ntBASIC14.87□□□□□ -0.03
KRT6CP48668 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC14.87□□□□□ -0.03
KRT6CP48668 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
KRT6CP48668 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
KRT6CP48668 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
KRT6CP48668 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
KRT6CP48668 AL359258.3-201ENST00000622910 2331 ntBASIC14.87□□□□□ -0.03
KRT6CP48668 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
KRT6CP48668 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
KRT6CP48668 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
KRT6CP48668 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
KRT6CP48668 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC14.87□□□□□ -0.03
KRT6CP48668 AC100757.3-201ENST00000622361 1406 ntBASIC14.87□□□□□ -0.03
KRT6CP48668 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
KRT6CP48668 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
KRT6CP48668 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
KRT6CP48668 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
KRT6CP48668 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
KRT6CP48668 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC14.87□□□□□ -0.03
KRT6CP48668 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC14.87□□□□□ -0.03
KRT6CP48668 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC14.87□□□□□ -0.03
KRT6CP48668 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC14.87□□□□□ -0.03
KRT6CP48668 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC14.87□□□□□ -0.03
KRT6CP48668 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC14.87□□□□□ -0.03
KRT6CP48668 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC14.87□□□□□ -0.03
KRT6CP48668 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC14.87□□□□□ -0.03
KRT6CP48668 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC14.87□□□□□ -0.03
KRT6CP48668 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC14.87□□□□□ -0.03
KRT6CP48668 AL844908.2-201ENST00000609461 460 ntBASIC14.87□□□□□ -0.03
KRT6CP48668 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC14.87□□□□□ -0.03
KRT6CP48668 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
KRT6CP48668 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
KRT6CP48668 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
KRT6CP48668 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
KRT6CP48668 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
KRT6CP48668 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC14.87□□□□□ -0.03
KRT6CP48668 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
KRT6CP48668 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
KRT6CP48668 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC14.87□□□□□ -0.03
KRT6CP48668 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC14.87□□□□□ -0.03
KRT6CP48668 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms