Protein–RNA interactions for Protein: P48539

PCP4, Calmodulin regulator protein PCP4, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCP4P48539 FMNL1-202ENST00000331495 4101 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
PCP4P48539 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
PCP4P48539 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC10.06□□□□□ -0.8
PCP4P48539 GHET1-201ENST00000627071 1906 ntBASIC10.06□□□□□ -0.8
PCP4P48539 EFHD1-203ENST00000409708 1817 ntTSL 2 BASIC10.06□□□□□ -0.8
PCP4P48539 AC010970.1-201ENST00000445125 1848 ntBASIC10.06□□□□□ -0.8
PCP4P48539 ABI2-202ENST00000261017 6484 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
PCP4P48539 MOB3C-201ENST00000271139 2800 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
PCP4P48539 SCN5A-202ENST00000333535 8456 ntAPPRIS P5 TSL 1 (best) BASIC10.06□□□□□ -0.8
PCP4P48539 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC10.06□□□□□ -0.8
PCP4P48539 MSMO1-201ENST00000261507 2269 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
PCP4P48539 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC10.06□□□□□ -0.8
PCP4P48539 BCKDHA-202ENST00000457836 1745 ntTSL 2 BASIC10.06□□□□□ -0.8
PCP4P48539 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
PCP4P48539 LINC01561-201ENST00000369071 2176 ntBASIC10.06□□□□□ -0.8
PCP4P48539 WTAPP1-202ENST00000525739 2642 ntTSL 2 BASIC10.06□□□□□ -0.8
PCP4P48539 FAM189A2-202ENST00000303068 2051 ntTSL 2 BASIC10.06□□□□□ -0.8
PCP4P48539 ZDHHC22-201ENST00000319374 3408 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
PCP4P48539 MED22-210ENST00000614493 3886 ntAPPRIS ALT1 TSL 2 BASIC10.06□□□□□ -0.8
PCP4P48539 PPP4R3B-203ENST00000611717 5243 ntAPPRIS P3 TSL 1 (best) BASIC10.06□□□□□ -0.8
PCP4P48539 PLCG2-207ENST00000564138 8707 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
PCP4P48539 FAM84A-202ENST00000331243 3765 ntAPPRIS P1 TSL 3 BASIC10.06□□□□□ -0.8
PCP4P48539 AC139099.1-202ENST00000574098 2409 ntBASIC10.06□□□□□ -0.8
PCP4P48539 NDST2-207ENST00000639645 2448 ntTSL 5 BASIC10.06□□□□□ -0.8
PCP4P48539 SATB1-204ENST00000417717 4589 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
PCP4P48539 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
PCP4P48539 AC006372.3-201ENST00000444158 4049 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
PCP4P48539 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
PCP4P48539 LGR5-202ENST00000536515 2664 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
PCP4P48539 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC10.06□□□□□ -0.8
PCP4P48539 CFAP69-213ENST00000497910 3032 ntAPPRIS ALT2 TSL 2 BASIC10.06□□□□□ -0.8
PCP4P48539 GNG4-204ENST00000450593 4978 ntAPPRIS P1 TSL 4 BASIC10.06□□□□□ -0.8
PCP4P48539 GREM2-201ENST00000318160 4170 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
PCP4P48539 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC10.06□□□□□ -0.8
PCP4P48539 MYO18B-202ENST00000407587 8090 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
PCP4P48539 SLC8A1-201ENST00000332839 2922 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
PCP4P48539 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
PCP4P48539 ADGRE5-201ENST00000242786 3188 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
PCP4P48539 JPT2-206ENST00000562684 3185 ntTSL 2 BASIC10.06□□□□□ -0.8
PCP4P48539 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
PCP4P48539 AC007622.2-202ENST00000546714 1680 ntTSL 2 BASIC10.06□□□□□ -0.8
PCP4P48539 CLTCL1-210ENST00000617926 1695 ntTSL 2 BASIC10.06□□□□□ -0.8
PCP4P48539 CYBRD1-202ENST00000375252 3540 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
PCP4P48539 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC10.06□□□□□ -0.8
PCP4P48539 KIAA0895-202ENST00000317020 4241 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
PCP4P48539 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC10.05□□□□□ -0.8
PCP4P48539 PSMD2-206ENST00000439383 2633 ntTSL 2 BASIC10.05□□□□□ -0.8
PCP4P48539 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC10.05□□□□□ -0.8
PCP4P48539 PRICKLE1-209ENST00000552240 3311 ntAPPRIS P1 TSL 5 BASIC10.05□□□□□ -0.8
PCP4P48539 REXO1L4P-201ENST00000605109 1937 ntBASIC10.05□□□□□ -0.8
PCP4P48539 NPAP1P6-201ENST00000440671 3484 ntBASIC10.05□□□□□ -0.8
PCP4P48539 NNT-202ENST00000344920 4310 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
PCP4P48539 AL022476.1-201ENST00000443063 2083 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
PCP4P48539 AC115284.2-201ENST00000624646 2054 ntBASIC10.05□□□□□ -0.8
PCP4P48539 MUC4-203ENST00000346145 3982 ntAPPRIS P4 TSL 1 (best) BASIC10.05□□□□□ -0.8
PCP4P48539 CIT-203ENST00000392521 8708 ntAPPRIS ALT1 TSL 1 (best) BASIC10.05□□□□□ -0.8
PCP4P48539 SSFA2-203ENST00000409136 3610 ntAPPRIS ALT2 TSL 5 BASIC10.05□□□□□ -0.8
PCP4P48539 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC10.05□□□□□ -0.8
PCP4P48539 KLHL15-201ENST00000328046 6272 ntAPPRIS P1 TSL 2 BASIC10.05□□□□□ -0.8
PCP4P48539 CDK5RAP3-202ENST00000536708 1975 ntTSL 2 BASIC10.05□□□□□ -0.8
PCP4P48539 EDRF1-201ENST00000337623 4387 ntAPPRIS P3 TSL 5 BASIC10.05□□□□□ -0.8
PCP4P48539 COL22A1-203ENST00000435777 4355 ntAPPRIS ALT2 TSL 2 BASIC10.05□□□□□ -0.8
PCP4P48539 ADAMTS20-204ENST00000553158 4633 ntTSL 5 BASIC10.05□□□□□ -0.8
PCP4P48539 KRBA1-203ENST00000485033 3434 ntTSL 5 BASIC10.05□□□□□ -0.8
PCP4P48539 NUPR1-201ENST00000324873 5491 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
PCP4P48539 ZWINT-203ENST00000373944 1872 ntAPPRIS P3 TSL 1 (best) BASIC10.05□□□□□ -0.8
PCP4P48539 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC10.05□□□□□ -0.8
PCP4P48539 AL049829.3-201ENST00000604456 1875 ntBASIC10.05□□□□□ -0.8
PCP4P48539 OSBPL1A-201ENST00000319481 4195 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
PCP4P48539 GRM4-205ENST00000538487 4153 ntAPPRIS P1 TSL 2 BASIC10.05□□□□□ -0.8
PCP4P48539 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
PCP4P48539 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC10.05□□□□□ -0.8
PCP4P48539 AL592295.1-201ENST00000400984 884 ntBASIC10.05□□□□□ -0.8
PCP4P48539 DBI-210ENST00000542275 757 ntTSL 5 BASIC10.05□□□□□ -0.8
PCP4P48539 AC092437.1-201ENST00000624794 1048 ntBASIC10.05□□□□□ -0.8
PCP4P48539 DNM3-202ENST00000367731 7613 ntAPPRIS P3 TSL 1 (best) BASIC10.05□□□□□ -0.8
PCP4P48539 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC10.05□□□□□ -0.8
PCP4P48539 MORC2-201ENST00000215862 4469 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
PCP4P48539 L3MBTL1-204ENST00000418998 3365 ntAPPRIS ALT2 TSL 2 BASIC10.05□□□□□ -0.8
PCP4P48539 STAG3L5P-PVRIG2P-PILRB-201ENST00000310771 3634 ntTSL 2 BASIC10.05□□□□□ -0.8
PCP4P48539 POLE-207ENST00000535270 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
PCP4P48539 USP20-202ENST00000358355 4371 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
PCP4P48539 AP001107.1-201ENST00000501708 2792 ntTSL 2 BASIC10.05□□□□□ -0.8
PCP4P48539 SEMA6D-206ENST00000389428 5874 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
PCP4P48539 BCAS3-203ENST00000408905 3514 ntAPPRIS ALT2 TSL 5 BASIC10.05□□□□□ -0.8
PCP4P48539 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
PCP4P48539 AC009549.1-201ENST00000603468 1686 ntBASIC10.05□□□□□ -0.8
PCP4P48539 LINC00689-201ENST00000413238 4684 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
PCP4P48539 SIRT5-203ENST00000379262 2339 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
PCP4P48539 CICP2-201ENST00000420675 2328 ntBASIC10.05□□□□□ -0.8
PCP4P48539 AL513497.1-201ENST00000624273 2083 ntBASIC10.05□□□□□ -0.8
PCP4P48539 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC10.05□□□□□ -0.8
PCP4P48539 AC022144.1-201ENST00000602255 1580 ntBASIC10.05□□□□□ -0.8
PCP4P48539 SMG7-214ENST00000508461 3985 ntAPPRIS ALT2 TSL 2 BASIC10.05□□□□□ -0.8
PCP4P48539 SHC1-202ENST00000368445 3472 ntAPPRIS ALT1 TSL 1 (best) BASIC10.05□□□□□ -0.8
PCP4P48539 TRPV5-201ENST00000265310 2952 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
PCP4P48539 IL21R-202ENST00000395754 2953 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
PCP4P48539 PUS7L-202ENST00000416848 4364 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
PCP4P48539 ADCK1-201ENST00000238561 2234 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
PCP4P48539 RIPOR3-201ENST00000045083 4279 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
Retrieved 100 of 98,524 protein–RNA pairs in 63.2 ms